Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1353 ATGTCTCTGTTGGGTGTTTATTCCATCTGTGAGGTTGGCAAAGATGCAGCAGGAGTTGCTGGTAACATGTTTGCTTTTGGGTTGTTTTTATCGCCCATACCTACATTTAGGAGAATCATCAGAAATGGGTCAACAGAAATGTTCTCAGGGCTGCCATATGTTTATTCTCTCTTGAACTGCTTGATCTGCTTGTGGTATGGCACACCTCTTATATCACCTGATAATCTGTTGGTGACAACTGTTAATACAATTGGGGGAGTCTTTCAGCTTGTGTACATAACCATCTTCTTGATTTATGCTGAGAAAGCAAGAAAGGTGAGAATGCTTGGATTACTCTTAGCAGTTTTGGGCATATTTGTGATCATACTAGTTGGGAGCTTGCAAATTGATGACAGGGCAATGAGACGGATGTTTGTGGGACTCTTGAGTTGTGCTTCTCTCATTTCAATGTTTGCCTCTCCATTGTTTATAATTAAATTGGTCATTCGGACAAAAAGTGTAGAATTTATGCCTTTTTATCTTTCACTTTCCACCTTCCTGATGAGCATCTCTTTCTTTCTTTACGGATTGGTCAGTGATGATACATTCATTTATGTGCCAAATGGGATAGGAACTGTTTTAGGAATTGTGCAATTGATATTATATTTCTATTACAAGAGTTCATCCACTGAAAACTACAGACAGCCCTTGATAGTATCGTGTGAATGA 708 0.3884 MSLLGVYSICEVGKDAAGVAGNMFAFGLFLSPIPTFRRIIRNGSTEMFSGLPYVYSLLNCLICLWYGTPLISPDNLLVTTVNTIGGVFQLVYITIFLIYAEKARKVRMLGLLLAVLGIFVIILVGSLQIDDRAMRRMFVGLLSCASLISMFASPLFIIKLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLVSDDTFIYVPNGIGTVLGIVQLILYFYYKSSSTENYRQPLIVSCE* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1353 235 Pfam Sugar efflux transporter for intercellular exchange 138 221 IPR004316 GO:0016021
Vra2g1353 235 Pfam Sugar efflux transporter for intercellular exchange 18 103 IPR004316 GO:0016021
Vra2g1353 235 PANTHER RAG1-ACTIVATING PROTEIN 1 11 234 - -
Vra2g1353 235 Gene3D - 12 105 - -
Vra2g1353 235 Gene3D - 136 223 - -
Vra2g1353 235 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET2 11 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1353 Vra-Chr2 21532414 21533917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1353 8 233 Miscellaneous Gene Families AT3G14770 65.198 2.99e-104 300