Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1352 ATGGCGCTGCTGTGTGGTTCAACTTCTGTGACTCCGTTACTTTCCCACAAGAACGTTGTGGCAGCTTCAACAAAATCTTCCTTTGGAGGCTTCCAATTGTCACTTCCAAAGCTTACATTATCTTCTTCTGTTCGAACCCTTTTACCCTCAAATTCCCGTATCCGTTGTCAACAGGACTCTACCACGCCTGCCCCAGTCGAAGACCCGCGTTTCGCCGTCGTCGAGCCCGAACCCCGATTCACAGGCCCGGACATTTGGAACAAGAGCTGGTATCCAAAAGCTGCAGATCATGTAAATACAGAGAAAACATGGTATGTTGTTGACGCTACAGATAAAGTTCTTGGAAGATTAGCTTCTACAATTGCTATTCACATCAGAGGGAAAAACTTAGCAACCTACACACCCAGTGTGGACATGGGTGCATTTGTAATTGTGGTAAATGCAGAAAAGATTGCTGTATCTGGGAAAAAGAGGACTCAAAAGCTTTATAGAAGACACTCTGGAAGACCTGGTGGTATGACGGTGGAGACATTTGCTCAGCTGCAAAAGAGAATTCCTGAAAGAATTATTGAACATGCTGTTCGGGGCATGCTTCCAAAAGGGAGGCTTGGCAGGAGACTATTCACCCACCTGAAGGTTTACGAGGGCCCCGATCATCCACATGCGGCACAAAAGCCCATTGACTTGCCAATAAGGGATAAGAGAATACACCTCCAGAAATAG 723 0.4633 MALLCGSTSVTPLLSHKNVVAASTKSSFGGFQLSLPKLTLSSSVRTLLPSNSRIRCQQDSTTPAPVEDPRFAVVEPEPRFTGPDIWNKSWYPKAADHVNTEKTWYVVDATDKVLGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFAQLQKRIPERIIEHAVRGMLPKGRLGRRLFTHLKVYEGPDHPHAAQKPIDLPIRDKRIHLQK* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1352 240 Hamap 50S ribosomal protein L13 [rplM]. 104 228 IPR005822 GO:0003735|GO:0005840|GO:0006412
Vra2g1352 240 PANTHER BNAA02G18970D PROTEIN 60 240 - -
Vra2g1352 240 Pfam Ribosomal protein L13 102 220 IPR005822 GO:0003735|GO:0005840|GO:0006412
Vra2g1352 240 ProSitePatterns Ribosomal protein L13 signature. 194 216 IPR023563 GO:0003735|GO:0005840|GO:0006412
Vra2g1352 240 TIGRFAM rplM_bact: ribosomal protein uL13 98 229 IPR005823 GO:0003735|GO:0005840|GO:0006412
Vra2g1352 240 CDD Ribosomal_L13 104 217 IPR005822 GO:0003735|GO:0005840|GO:0006412
Vra2g1352 240 Gene3D Ribosomal protein L13 93 236 IPR036899 GO:0003735|GO:0005840|GO:0006412
Vra2g1352 240 PANTHER RIBOSOMAL PROTEIN L13 60 240 IPR005822 GO:0003735|GO:0005840|GO:0006412
Vra2g1352 240 SUPERFAMILY Ribosomal protein L13 98 231 IPR036899 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1352 106 239 Cytoplasmic Ribosomal Protein Gene Family AT3G07110 33.333 5.82e-08 50.1