Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1344 ATGAAGATTCAGTGCAACGTGTGCGAAGCTGCAGAGGCCAAGGTCCTCTGTTGCGCAGACGAAGCCGCACTTTGCTTGGAATGCGATGAAAAGGTTCACGCCGCAAACAAGCTCGCCACCAAGCACCAAAGGGTCCCCCTTTCTCTCTCTGCTTCCCACGTCCCAAAGTGTGACATATGTCAGAGGTTTTTGCTTACTGGTGTGAGAGTAGGCCTTGAAGCTACTGAGCCTGGTGCTTCCTCATCCTCTGTCAAATCACAATCTGGGGAGAAAATATCTGATGCTAAATCTTCATCCATCTCCAGAAACGTTTCCTCCATGCCACAGCCACCAAATTTTAATGAAGTGTTTCCCTCCGAAATGGGAGGAGTTGAGGACTTTCCACCAAACAAGGTGTCTTATGGTGGCGGTTATACTGCTGGAAACATCTCACAATGGCCCATGGAAGAATTTCTCGGGTTAAATGAATTCAGTCAGTATTATAACTATATGGATGGATCATCTAAGGCTGACAGTGGTAAACTTGGGGATTCTGATTCATCTGTTTTGAGGTCTAGTGAAGAGGAAATTGATGATGATGGCTTCTTGGGGCGTGTTCCAGATTCATCCTGGACAGTTCCTCAAATCCCTTCCCCTCCTACGGCTTCCGGATTACACTGCCCGGAACTCCGGCGATATACATCTGACAATGCTATGTTTGTTCCTGACATATGCTTTTCCGGTGAGCGGAGGCAGCCTCGCCGTGTTCTTCATCATTCTATTCATCCAAAACGGCGGAGGAACCTATAA 789 0.4766 MKIQCNVCEAAEAKVLCCADEAALCLECDEKVHAANKLATKHQRVPLSLSASHVPKCDICQRFLLTGVRVGLEATEPGASSSSVKSQSGEKISDAKSSSISRNVSSMPQPPNFNEVFPSEMGGVEDFPPNKVSYGGGYTAGNISQWPMEEFLGLNEFSQYYNYMDGSSKADSGKLGDSDSSVLRSSEEEIDDDGFLGRVPDSSWTVPQIPSPPTASGLHCPELRRYTSDNAMFVPDICFSGERRQPRRVLHHSIHPKRRRNL* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1344 262 MobiDBLite consensus disorder prediction 181 196 - -
Vra2g1344 262 PANTHER B-BOX ZINC FINGER PROTEIN 18 1 61 - -
Vra2g1344 262 PANTHER B-BOX ZINC FINGER PROTEIN 18 61 249 - -
Vra2g1344 262 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 61 - -
Vra2g1344 262 PANTHER B-BOX ZINC FINGER PROTEIN 22 61 249 - -
Vra2g1344 262 CDD Bbox1_BBX-like 5 47 - -
Vra2g1344 262 MobiDBLite consensus disorder prediction 76 112 - -
Vra2g1344 262 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Vra2g1344 262 MobiDBLite consensus disorder prediction 168 197 - -
Vra2g1344 262 SMART bboxneu5 4 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1344 Vra-Chr2 21437202 21442095 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1344 1 237 C2C2-CO-like Transcription Factor Family AT1G78600 40.323 6.22e-57 183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1344 2 21437202 21442095 Vra2g1344 2 21437202 21442095 ECH