Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1341 ATGCGATGGAAATATCAAATGATTCAGAGACTTAGTGGATCAAGTAACAGCGGAACTACTCATCTGAGAAATCACTTGATGCGGTGTTTGAAAAGATCAAATTTTGACGTGTCTCAATTACTTGCTGCAAAGAGAAGGAAGAAAGATAATACCATCAGTCTAGCAAACATTAGTTTTGATGAAGGTCAGAGGAAAGAAGAATATATAAAGCCAACGATTATCAAGTTTGAACAGGAGCATAAGAAGGATGATATCATTAGCTTCGGAAGTAGTAAATTTGATCAGGAAAGGAGTCAACTTGATCTTGCACGCATGATCATATTACATGGATACCCATTGAGCTTGGTTGAACAAGTAGGATTCAAGGTCTTTGTGAAGAACCTCCAGCCTCTCTTTGAGTTCATGCCAAACAGTGCTGTAGAGATTTCTTGTATAGATATCTATAGGAGGGAGAAAGAAAAAATGTATGATATGATAAACAAACTACAAGGTAGAATTAATCTGTCTATTGAAATGTGGTCTTCAGCAGAAAATTCTTCGTATTTATGCTTGTCTGCTCATTATATTGACGAGGAATGGACATTACAGAAGAAAATCTTGAACTTTGTCACACTTGATTCTTTGCATACTGAAGACTTACTTCCAGAAGTGATTATCAAATGTCTCAATGAATGGGATATTGATGGCAAGCTTTTTGCCTTGACACTTGATGATTGTTCCATCGATGATGACATCACCCTTAGAATAAAGGAGCGAGTTTCTGAGAAAAGGCCTTTCTTAAGTACTCGTCAGTTACTCGACATACGCTCTGCAGCACATCTCATAAATTCCGTTGCTCAAGATGCCATGGATGCATTACAGGAAGTGATCCAAAAGATTCGAGAGAGTATCAGATATGTTAGAAGTTCACAATTAGTGCAGGCAAAATTTAATGAAATTGCTCAGCATGCTACAGTTAACACGCAGAAGGTGTTGTTTCTTGATTTTCCTGTTCAGTGGAAGTCTACATATCTCATGCTTGAAACTGCGGTAGAATACAGGAGTGCTTTTTCTCTCTTCCAAGATCACGATCCCTCTTATTCATCAACATTAACTGATGAAGAGTGGGAATGGGCCACTTCAGTTACTGGATACTTAAAACTTTTAGTTGAAATTACAAACGTATTTTCGGCCAACAAATTTCCTACTGCTAATATATATTTCCCTGAGATTTGTGACGTCCATATTCAATTAATTGATTGGTGCAGAAGTTCAGATAGTTTTCTTAGTCCCATGGCTTTGAAGATGAAAGCCAAATTTGACAAGTACTGGAGCAAGTGCAGTTTAGCTTTAGCTCTCGCTGCTGTTCTAGATCCTCGGTTTAAAATGAAATTGGTTGAGTACTACTACTCCCTGATTTATGGCAGCACTGCTCTGGATCGTATCAAGGAAGTTTCTGATGGTATCAAAGAACTTTTTAACGCGTATTCTATTTGTTCAACTATGATTGATCAAGGCTCAGCCTTGCCTGGTAGCAGTTTGCCTAGTACTAGTTGTAGTTCCAGAGACAGGCTAAAAGGCTTTGACAGATTCCTTCATGAGACATCACAGAACCAGTCTATGACATCAGACTTGGACAAGTATTTAGAGGAACCAATCTTTCCACGTAATTCTGATTTTAACATATTGAACTGGTGGAAAGTCCACATGCCAAGGTACCCAATTTTGTCTATGATGGCACGTGATGTTCTAGGGACTCCAATGTCAACTTTGGCACCGGAATTGGCATTTGGCACTGGGGGCAGAGTGCTAGATTCTTCTCGTAGTTCACTAAACCCAGATACAAGAGAGGCTTTGATATGTACCCAAGATTGGCTCCGAAATGAATCTGGAGATCTAAATCCATCCCCAATCCATTCTGCTCTACCTCTTCTCATCGAATGA 1923 0.39 MRWKYQMIQRLSGSSNSGTTHLRNHLMRCLKRSNFDVSQLLAAKRRKKDNTISLANISFDEGQRKEEYIKPTIIKFEQEHKKDDIISFGSSKFDQERSQLDLARMIILHGYPLSLVEQVGFKVFVKNLQPLFEFMPNSAVEISCIDIYRREKEKMYDMINKLQGRINLSIEMWSSAENSSYLCLSAHYIDEEWTLQKKILNFVTLDSLHTEDLLPEVIIKCLNEWDIDGKLFALTLDDCSIDDDITLRIKERVSEKRPFLSTRQLLDIRSAAHLINSVAQDAMDALQEVIQKIRESIRYVRSSQLVQAKFNEIAQHATVNTQKVLFLDFPVQWKSTYLMLETAVEYRSAFSLFQDHDPSYSSTLTDEEWEWATSVTGYLKLLVEITNVFSANKFPTANIYFPEICDVHIQLIDWCRSSDSFLSPMALKMKAKFDKYWSKCSLALALAAVLDPRFKMKLVEYYYSLIYGSTALDRIKEVSDGIKELFNAYSICSTMIDQGSALPGSSLPSTSCSSRDRLKGFDRFLHETSQNQSMTSDLDKYLEEPIFPRNSDFNILNWWKVHMPRYPILSMMARDVLGTPMSTLAPELAFGTGGRVLDSSRSSLNPDTREALICTQDWLRNESGDLNPSPIHSALPLLIE* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1341 640 Coils Coil 276 296 - -
Vra2g1341 640 Pfam Domain of unknown function (DUF4413) 390 489 IPR025525 GO:0003677
Vra2g1341 640 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN RICESLEEPER 1-LIKE 9 623 - -
Vra2g1341 640 SUPERFAMILY Ribonuclease H-like 157 621 IPR012337 -
Vra2g1341 640 PANTHER BED FINGER-RELATED 9 623 IPR045259 -
Vra2g1341 640 Coils Coil 145 165 - -
Vra2g1341 640 Pfam hAT family C-terminal dimerisation region 537 619 IPR008906 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1341 Vra-Chr2 21395558 21399300 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1341 2 21395558 21399300 Vra2g1341 2 21395558 21399300 ECH