Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1337 ATGGATTTGATGTTCCCTTTGAAACCGCACAGTGTTATTCTCAAAGCACCACTCTTTTCTTCTCTGTCGTTCCCTCTTCCTCTCAGGTTCCGTGCTGTCACCGCTTTCAAGCATGTAAATATTCAATGCGAGCTTGAAGGTCGACCCAATGGTGCTCTCTCCGGTGGTGATTTCGACCCTCGCTTCATTGATAGGCAAAAAGCACTAGAAGCAGCAATGAATGATATAAACAGCTCCTTTGGAAAGGGAAGTGTTACAAGACTGGGCAGTGCTGGTGGAGCTTTGGTTGAAACTTTTCCCAGTGGTTGTTTGACCTTGGACTGTGCTTTAGGTGGTGGTCTTCCTAAAGGAAGAATTGTAGAGATATTTGGACCAGAAAGTAGTGGGAAAACCACCCTAGCTCTTCATGCTATTGCAGAAGTGCAGAAGTTAGGAGGCAATGCGATGCTTGTTGATGCAGAGCATGCTTTTGATCCTGCATATTCTAAAGCATTAGGAGTGGATGTAGAAAACTTAATTGTATGCCAACCTGATCATGGAGAAATGGCCCTTGAGATTGCAGACCGAATGTGTAGATCTGGTGCCATAGATCTCATTTGTGTGGATTCTGTCTCAGCTCTCACTCCACGAGCTGAAATTGAAGGGGAAATTGGAATGCAACAAATTGGATTACAAGCTCGTCTTATGAGCCAAGCTTTGCGTAAGATGTCTGGAAATGCATCTAAAGCTGGTTGTACTCTTGTATTTTTAAATCAAATAAGATATAAGATTGGTGTCTATTATGGAAATCCAGAAGTGACCAGTGGAGGAATTGCATTGAAGTTCTTTGCATCACTTCGGCTAGAAGTTCGTCCTATAGGGAAGATAAAGTCTGCTAAAGGAGATGAAGAAATTGGCCTTAAAGTTCGTTTAAGAGTGCAAAAGAGCAAGGTGTCAAGGCCTTACAAAATAGCTGAATTTGAAATTATATTTGGAGAGGGTATCAGTAAGCTGGGCTGCATTTTAGATTGTGCAGAAATGACGGATATTGTCTCAAAGAAGGGCTCTTGGTACAGCTATGGAGACCATCGGTTGGGACAGGGAAGGGACAAAGCAATACAATACTTGAAGGAGAACACGTATCTTTTAGAAGAAATTGAAAAGGTAGTTAGGTCTTCATTGGTTGATGGAAGTAACCAAGCAAGCCTTGCACACATGAAGAACAGTCCAGTGCTACATCAAGATGATGATATATTTGAGGAAAGTCAGTGA 1251 0.4221 MDLMFPLKPHSVILKAPLFSSLSFPLPLRFRAVTAFKHVNIQCELEGRPNGALSGGDFDPRFIDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLVFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEVRPIGKIKSAKGDEEIGLKVRLRVQKSKVSRPYKIAEFEIIFGEGISKLGCILDCAEMTDIVSKKGSWYSYGDHRLGQGRDKAIQYLKENTYLLEEIEKVVRSSLVDGSNQASLAHMKNSPVLHQDDDIFEESQ* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1337 416 PRINTS RecA protein signature 152 181 IPR013765 GO:0003697|GO:0005524|GO:0006281
Vra2g1337 416 PRINTS RecA protein signature 186 215 IPR013765 GO:0003697|GO:0005524|GO:0006281
Vra2g1337 416 PRINTS RecA protein signature 224 253 IPR013765 GO:0003697|GO:0005524|GO:0006281
Vra2g1337 416 PRINTS RecA protein signature 269 297 IPR013765 GO:0003697|GO:0005524|GO:0006281
Vra2g1337 416 PRINTS RecA protein signature 304 333 IPR013765 GO:0003697|GO:0005524|GO:0006281
Vra2g1337 416 PRINTS RecA protein signature 358 375 IPR013765 GO:0003697|GO:0005524|GO:0006281
Vra2g1337 416 Hamap Protein RecA [recA]. 65 390 IPR013765 GO:0003697|GO:0005524|GO:0006281
Vra2g1337 416 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 328 IPR027417 -
Vra2g1337 416 ProSiteProfiles RecA family profile 1. 95 253 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Vra2g1337 416 ProSiteProfiles RecA family profile 2. 258 333 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Vra2g1337 416 CDD recA 64 387 IPR013765 GO:0003697|GO:0005524|GO:0006281
Vra2g1337 416 Gene3D - 329 403 - -
Vra2g1337 416 PANTHER MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG 62 402 - -
Vra2g1337 416 ProSitePatterns recA signature. 272 280 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Vra2g1337 416 PANTHER RECA 62 402 IPR013765 GO:0003697|GO:0005524|GO:0006281
Vra2g1337 416 SMART AAA_5 116 287 IPR003593 -
Vra2g1337 416 TIGRFAM tigrfam_recA: protein RecA 64 384 IPR013765 GO:0003697|GO:0005524|GO:0006281
Vra2g1337 416 SUPERFAMILY RecA protein, C-terminal domain 329 385 IPR023400 -
Vra2g1337 416 Gene3D - 87 328 IPR027417 -
Vra2g1337 416 Pfam recA bacterial DNA recombination protein 67 329 IPR013765 GO:0003697|GO:0005524|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1337 Vra-Chr2 21310749 21327850 Transposed