Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra2g1297 | ATGGAAGGGGGATCTACAGTTTCTACAATGGTGATGTGTATGGTGGTGAGTGGTCTAATGGGCAGTGATGGGAGCCGCTATGTTGGGGAGTTCAAGTGGGGTGAAAAACATGGACAAGGACAGTACCATTTCAGAAATGGGGACATATACGCTGGGGAATATTTTGCAGACAAGATGCATGGTTTTGGAGTATATCAATTTCAGAACGGTCATCAGTATGAGGGGGCATGGCATGAAGGAAGAAGACAAGGACTTGGAATGTACACTTTTACAAATGGGGAAACACAATGTGGTCATTGGCAGAATGGAATTCTTGATGATCCTAAAAGACATAACAGTCCTAATGGGTCTCCATGTGATGTGGACCATGCCAAGGTTTCCAATGTAGTACAGGATGCACATTCTGCTGCTGAGAAAACTTACAACATGTCAAAGGTGGATGGAGGAATGAATAAAGTAGTGGCAGCAGCTAATAAAGCAGCCAATGCAGCCAGAGTTGCAGCTGTAAAAGCTGTGCAAAATAGGATGACCATAACAATAATGATAAATGATAATAGCCATTTTCTCAATCTTGTGATGATAGAAAGCTTCAATCAGTGTCAATGTGTCATCCTCCATCATAGGTTTGCATACAGAACATTAGTAGATATGAAAAAGCAAAGGAAGCAGAGAATTCAAGGAGGGAGAATCATAAACATGTGCAAATAA | 708 | 0.4138 | MEGGSTVSTMVMCMVVSGLMGSDGSRYVGEFKWGEKHGQGQYHFRNGDIYAGEYFADKMHGFGVYQFQNGHQYEGAWHEGRRQGLGMYTFTNGETQCGHWQNGILDDPKRHNSPNGSPCDVDHAKVSNVVQDAHSAAEKTYNMSKVDGGMNKVVAAANKAANAARVAAVKAVQNRMTITIMINDNSHFLNLVMIESFNQCQCVILHHRFAYRTLVDMKKQRKQRIQGGRIINMCK* | 236 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra2g1297 | 235 | Pfam | MORN repeat | 27 | 48 | IPR003409 | - | |
| Vra2g1297 | 235 | Pfam | MORN repeat | 73 | 94 | IPR003409 | - | |
| Vra2g1297 | 235 | Pfam | MORN repeat | 50 | 71 | IPR003409 | - | |
| Vra2g1297 | 235 | SMART | morn | 71 | 92 | IPR003409 | - | |
| Vra2g1297 | 235 | SMART | morn | 48 | 69 | IPR003409 | - | |
| Vra2g1297 | 235 | SMART | morn | 25 | 46 | IPR003409 | - | |
| Vra2g1297 | 235 | PANTHER | MORN REPEAT PROTEIN | 22 | 178 | - | - | |
| Vra2g1297 | 235 | SUPERFAMILY | Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 22 | 117 | - | - | |
| Vra2g1297 | 235 | PANTHER | PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED | 22 | 178 | - | - | |
| Vra2g1297 | 235 | Gene3D | - | 18 | 55 | - | - | |
| Vra2g1297 | 235 | Gene3D | - | 56 | 120 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vra2g1297 | Vra-Chr2 | 20092463 | 20096209 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vra2g1297 | 21 | 139 | Acyl Lipid Metabolism Gene Families | AT1G21980 | 35.294 | 4.78e-16 | 75.1 |