Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1280 ATGGAAGTTGATGCAGCGATGATGTCTGTTGGAATTTTGGTTGCATTTGTTATCCTATTCTTAACGAAAGCACTGAGTTGGGTGTGGTTGGAACCGAAAAGGGCAGAGAGATTTCTCAGAAGACAAGGCATAAAGGGAAACTCATACAAGCTTGTCTTTGGAGACACAAAAGAATTAACCATGATGCTGCATCAAGCACATTCTAAACCCATACACATCGATGATGATATTGCAACTCGCCTAGTTCCATTTCAAAATCAATTGGTCAAAGTTTCTGGTAAGAATTCGTTTTTCTGGTATGGTCCTAAGATTACAGTGAATATTATGGATCCTGAAGCAATAAAAGAGGTTCTGAACATGATAAATGACTTTCCTAAACCAAACCTTAATCCACTAGGCAAGTTCCTGATAACAGGACTTGTAGATCTTGAGGGAGACAAATGGTCAAAGCACAGAAAGATCATCAACCCTGCATTTAATCTCGTCAAGCTCAAGCTTGTGTTGCCTGCCATGTATGATAGTTGCAACCAGATGATGAAGGAATGGAAGATGTTAGTGTGCGAAACAGGATCATGTGTGGTAGATGTCTGGCCATTCTTAAACAACTTGACAGCTGATGTGATTTCTCGTACAGCTTTCGGAAGCAACTATGAAGAAGGAAAAATAGTATTTCAACTCTTAAAAGAACAAGCTAAACTTACATCCAAGGTCTTTCGATCTATTTACATACCAGGGTGGAGGTTTCTACCAACTACATTAAACAAGAGGATGAAGAAGATTGACAATGAAATTGGAAATGTACTTCGTGGAATTATCCAAAAGCAAGAGGGTATTATGAAAACATGCGAAGCTTCGAATGATAACCTATTAGGGCTACTATTGGAATCCAATCAAAAAGAGATTGAAGATCAAGAAGGACTTAAGAAAGATGTTGGAATGAACACCAATGATGTAATTAAGGAGTGTAAGTTATTTTACTTTGCCGGACAAGAAACAACATCGGTGCTACTAAATTGGACAATGGTGTTATTAAGTAGGTTTCCCAAATGGCAAACACTAGCAAGGGAAGAGGTCATTGAAATTTTTGGCACAAAAGAACCAGACTATGATGGATTAAGTCGTCTTAAAGTTGTGACAATGATTTTGTACGAGGTTTTAAGATTATATCCACCAGTTACTGCTATTACAAGAATCCTAAGGAAGAAAGCTAAAGTTGGAAACATGAGTTTACCAGCAGGAGCACTAGCTACTATTCCTGTTGTGTTGGTACATCATGATTTTGAATTATGGGGAAGTGATGCAAAAGAGTTCAAACCAGAAAGATTCTCAGAAGGAATCTCAAAAGCAACAAATGGTAAAGTTTCATTTATCCCATTTGGATGGGGTCCTCGAATATGCATTGGCCAAAACTTTGCTTTGCTTGAAGCCAAAATGGCTTTGTCTCTCATTCTGCAAAACTTCAAGTTTGAGCTATCTTCCTCCTATGTTCATGCTCCGATTGTAGTCATAACTGCTCAACCTCAATTCGGCACACACCTTATATTACAAAAATTATAG 1557 0.3802 MEVDAAMMSVGILVAFVILFLTKALSWVWLEPKRAERFLRRQGIKGNSYKLVFGDTKELTMMLHQAHSKPIHIDDDIATRLVPFQNQLVKVSGKNSFFWYGPKITVNIMDPEAIKEVLNMINDFPKPNLNPLGKFLITGLVDLEGDKWSKHRKIINPAFNLVKLKLVLPAMYDSCNQMMKEWKMLVCETGSCVVDVWPFLNNLTADVISRTAFGSNYEEGKIVFQLLKEQAKLTSKVFRSIYIPGWRFLPTTLNKRMKKIDNEIGNVLRGIIQKQEGIMKTCEASNDNLLGLLLESNQKEIEDQEGLKKDVGMNTNDVIKECKLFYFAGQETTSVLLNWTMVLLSRFPKWQTLAREEVIEIFGTKEPDYDGLSRLKVVTMILYEVLRLYPPVTAITRILRKKAKVGNMSLPAGALATIPVVLVHHDFELWGSDAKEFKPERFSEGISKATNGKVSFIPFGWGPRICIGQNFALLEAKMALSLILQNFKFELSSSYVHAPIVVITAQPQFGTHLILQKL* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1280 518 Pfam Cytochrome P450 86 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1280 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Vra2g1280 518 Coils Coil 515 518 - -
Vra2g1280 518 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1280 518 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1280 518 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1280 518 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1280 518 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1280 518 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1280 518 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1280 518 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1280 518 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1280 518 PANTHER CYTOCHROME 13 516 - -
Vra2g1280 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 13 516 - -
Vra2g1280 518 SUPERFAMILY Cytochrome P450 80 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1280 518 Gene3D Cytochrome P450 28 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1280 Vra-Chr2 18898486 18901624 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1280 1 518 Cytochrome P450 AT3G14690 54.143 0.0 596