Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1279 ATGAAAGTAATGGGCATGATGCTGCATCAAGCACAATCTAAACCCATACAAATCGACGATGATGTTGCATGTCGCCTGGTTCCATTTCAAAATCAATTGGTCAAAGAATGTGGTAAGAATTCGTTTTTCTGGTATGGGCCTAAGATTGCAGTGAATATTATGGAGCCTGAAGCAATAAAGGAGATTCTGAACATGATAAATGACTTTCCGAAGCCAAACCTTAATCCACTTGCCAAGTTACTGATAACAGGACTTGTAGATCTTGAAGGAGACAAATGGTCAAAGCACAGAAAGATCATCAACCCTGCATTTAATCTCGTCAAGCTCAAGCTTGTGTTGCCTGCCATGTATGATAGTTGCAACCAGATGATGAAGGAATGGAAGATGTTAGTGTGCGAAACAGGATCATGTGTGGTAGATGTCTGGCCATTCTTAAACAACTTGACAGCTGATGTGATTTCTCGTACAGCTTTCGGAAGTAACTATGAAGAAGGAAAAATAGTATTTCAACTCCTAAAAGAACAAGCTCAACTTACATCCAAGGTCTTTCAATCTGTTTATATTCCAGGGTGGAGGTTTGTACCAACGAAATTGAACAAGAGGATGAAGAAGATTGACTATGAAATTGGAAATGTACTTCGTGGAATTATCCAAAAGCAAGAGGGTATTATGAAAACATGCAAAGCTTCCAGTGATAATCTATTAGGCTTACTATTGGAATCAAATCAAAACGAGATTGAAGTTGGATTACTTAAGAAAGATGTTGGAATGAACACCAATGATGTAATTAACGAGTGTAAGGTATTTTACTTTGCCGGACAAGAAACAACATCGGTGCTACTAAATTGGACGATGGTGTTATTGAGTAGATTTCCCAAATGGCAAACACTAGCAAGAGAAGAAGTCATTGAAATTTTTGGCACAAAAGAACCAGATTATGATGGATTAAATCGTCTTAAAGTTGTGACAATGATTTTGTATGAGGTTTTAAGATTATACCCACCGGCTACTGCTATTACAAGAGTCATAAGGAAAGAAACTACAATTGGAAACATGAGCTTACCAGCAGGAGCACTAGCTACTATTCCAATTGTGTTGGTACATCATGATTTTGAATTATGGGGAAGTGATGCAAAAGAGTTCAAACCAGAAAGATTCTCAGAAGGAATCTCAAAAGCAACAAATGGTAAAGTTTCATTTATCCCATTTGGATGGGGTCCTCGAATATGCATTGGCCAAAACTTTGCTTTGCTTGAAGCCAAAATGGCTTTGTCTCTCATTCTGCAAAACTTCAAGTTTGAACTATCTTCCTCCTATGTTCATGCTCCAATTACAGTCATAACTGCTCAACCTCAATTCGGCACGCACCTTATATTACAAAAATTATAG 1389 0.3772 MKVMGMMLHQAQSKPIQIDDDVACRLVPFQNQLVKECGKNSFFWYGPKIAVNIMEPEAIKEILNMINDFPKPNLNPLAKLLITGLVDLEGDKWSKHRKIINPAFNLVKLKLVLPAMYDSCNQMMKEWKMLVCETGSCVVDVWPFLNNLTADVISRTAFGSNYEEGKIVFQLLKEQAQLTSKVFQSVYIPGWRFVPTKLNKRMKKIDYEIGNVLRGIIQKQEGIMKTCKASSDNLLGLLLESNQNEIEVGLLKKDVGMNTNDVINECKVFYFAGQETTSVLLNWTMVLLSRFPKWQTLAREEVIEIFGTKEPDYDGLNRLKVVTMILYEVLRLYPPATAITRVIRKETTIGNMSLPAGALATIPIVLVHHDFELWGSDAKEFKPERFSEGISKATNGKVSFIPFGWGPRICIGQNFALLEAKMALSLILQNFKFELSSSYVHAPITVITAQPQFGTHLILQKL* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1279 462 Gene3D Cytochrome P450 18 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1279 462 PRINTS P450 superfamily signature 272 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1279 462 PRINTS P450 superfamily signature 324 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1279 462 PRINTS P450 superfamily signature 401 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1279 462 PRINTS P450 superfamily signature 410 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1279 462 PRINTS E-class P450 group I signature 148 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1279 462 PRINTS E-class P450 group I signature 261 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1279 462 PRINTS E-class P450 group I signature 281 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1279 462 PRINTS E-class P450 group I signature 400 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1279 462 PRINTS E-class P450 group I signature 410 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1279 462 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 453 - -
Vra2g1279 462 SUPERFAMILY Cytochrome P450 26 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g1279 462 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 403 412 IPR017972 GO:0005506|GO:0016705
Vra2g1279 462 PANTHER CYTOCHROME P450 72A11-RELATED 6 453 - -
Vra2g1279 462 Pfam Cytochrome P450 30 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1279 Vra-Chr2 18880336 18889718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1279 7 462 Cytochrome P450 AT3G14690 56.455 0.0 548