Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1261 ATGGCAGCAACATTAATGGCAGCCTCTACAAGCACTGGCACTGTCCTTAAACCAACACCTTTCCTTGGCCAAAGTAGGGCAACCAATGCCAACCCTCTTAGAGATGTTGTCTCCATGGGAACTGGGAAATACACCATGGGAAATGAATTGTGGTATGGTCCAGACAGAGTGAAATACTTGGGACCCTTTTCAGCTCAGACTCCCTCATATTTGACTGGAGAATTCCCAGGGGACTATGGATGGGACACTGCTGGATTGTCTGCTGATCCTGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTGATCCATGGGCGTTGGGCTATGCTTGGAGCACTAGGATGCATAACACCAGAAGTGCTTGAGAAGTGGCTGAGAGTGGAGTTCAAGGAGCCAGTTTGGTTCAAAGCAGGAGCTCAAATATTCTCAGAAGGTGGCCTAGACTATCTGGGGAACCCTAACCTTGTGCATGCACAAAGCATCTTGGCAGTGCTAGGGTTCCAAGTTGTGCTTATGGGTCTTGTTGAAGGATTTCGCATAAATGGTCTTCCTGGTGTGGGAGAGGGCAATGATCTCTACCCTGGTGGCCAATACTTTGACCCTCTTGGCCTTGCTGATGACCCTGTCACTTTTGCTGAGCTCAAGGTTAAGGAGATCAAGAATGGAAGGTTGGCCATGTTCTCCATGTTTGGCTTCTTTGTCCAAGCCATTGTCACTGGGAAAGGACCACTTGAGAACCTTTTGGATCACCTTGACAACCCTGTGGCTAACAATGCTTGGGTCTATGCCACCAAATTTGTGCCGGGCTCTTAG 810 0.4889 MAATLMAASTSTGTVLKPTPFLGQSRATNANPLRDVVSMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1261 269 Gene3D Chlorophyll a/b binding protein domain 58 262 - -
Vra2g1261 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 7 269 IPR001344 GO:0009765|GO:0016020
Vra2g1261 269 SUPERFAMILY Chlorophyll a-b binding protein 50 266 - -
Vra2g1261 269 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 7 269 - -
Vra2g1261 269 Pfam Chlorophyll A-B binding protein 68 235 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1261 Vra-Chr2 18256426 18258568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1261 1 268 Chloroplast and Mitochondria Gene Families AT2G05070 67.509 2.34e-123 350
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1261 2 18256426 18258568 Vra2g1261 2 18256426 18258568 ECH