Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1260 ATGGTGGTGATAAATTGCAAGCGTTCAGTTTCTCGTTTCCTCGTTAAGAGTTTTGAAATGACAATGGCTGATGGTAATTACTGTAGAAAGTCGAGCTGGGAAATAGATATGGGAGACGGTAGTTATGATAGAACTTTGAGAGAGTTCTGTATTCCGGATTACATATTAGTGTCAGGATCTGAGGGAAAAAGTGTCTCGCCTGTACCTACGTGTCCTGTGATTGTTTTCATAAACTCCAAAAGTGGTGGCCAGCTTGGAGGGGAGCTTCTTGTTTCCTATAGTACACTTCTTAACAAAAACCAGGTTTTTGATTTGGGAAAAAATGCTCCGGATAAGGTGCTGCAGAGGCTTTATGCTACTTTGGAAACGCTCAAGCACAATGGGGATGATTTTGCAGCGGAAATTCAGAATAGATTGAGAATAATTGTTGCAGGTGGAGATGGTACTGCTAGCTGGCTTCTTGGAGTTGTATCTGACCTTAAATTACCTCATCCGCCACCAATTGCAACGGTGCCATTGGGGACGGGAAATAATCTTCCCTTTGCATTTGGATGGGGAAAGAAAAATCCAACCACGGATATTCAATCAGTGACGTCATTCCTAATGAATGTAAAAGCGGCAAAGGAAATGAAAATAGACAGCTGGCATATTGTTATGAGAATGAAGGCTCCAAAAGAAGGTTCATGTGACCCTATTGCACCCCTTGAGCTGCCTCACGCTATGCATGCATTTCAGCGTGTCTCTTCAACAGATAAGCTAAACATGGACGGTTACCACACTTTCCGTGGGGGATTTTGGAACTACTTTAGCATGGGAATGGATGCTCAAGTATCTTATGCATTTCATTCAGAGAGGAAATTGCATCCAGAAAAGTTTAAAAATCAGTTATATAATCAGAGTGCCTATCTGAAGCTTGGCTGTTCACAAGGGTGGTTCTTTTCTTCTCTGTTTCAATCTTCACGGAATATAGGTCAGCTGGCAAAGGTCAAAATAATGAAAAAAGGTCATTGGGAAGATCTCCACATACCTCGCAGCATTCGGTCAATTGTTTGCCTGAACTTGCCCAGCTTTTCTGGTGGACTCAATCCTTGGGGAAAACCAAATAGGAAGAAATCAATTTATAGGGACCTGACTCTTCCCTATGTGGATGATGGCCTATTTGAGGTAGTTGGTTTTAGAGATGCTTGGCATGGTCTTGTTTTGCTTGCACCAAATGGACACGGGACTCGTTTGGCACAGACAAGCAGAATCCGATTTGAGTTTCACAAGGGTGCAGCTGACTGCACATTCATGAGAATTGACGGAGAGCCATGGAAACAACCCCTACCAAAAGATGATGACACAGTCGTTGTTGAGATATCACACCATGGTCAAGTTAGCATGCTTGCCACCCAATTGTGCCGTTCTAAAAGTATGTATGATCCCTCCTCACCTTCTGTTGACCGGGAAGAAGATGATAGCACTGATGAAGAACTAGAAGAAGATTGCGAAGAACGCCGCAAATTTGGTGCAGCTGATACATTCAAATACCCTGATGGAATTGATATATCTCAAGTAAGTTAG 1563 0.4274 MVVINCKRSVSRFLVKSFEMTMADGNYCRKSSWEIDMGDGSYDRTLREFCIPDYILVSGSEGKSVSPVPTCPVIVFINSKSGGQLGGELLVSYSTLLNKNQVFDLGKNAPDKVLQRLYATLETLKHNGDDFAAEIQNRLRIIVAGGDGTASWLLGVVSDLKLPHPPPIATVPLGTGNNLPFAFGWGKKNPTTDIQSVTSFLMNVKAAKEMKIDSWHIVMRMKAPKEGSCDPIAPLELPHAMHAFQRVSSTDKLNMDGYHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFKNQLYNQSAYLKLGCSQGWFFSSLFQSSRNIGQLAKVKIMKKGHWEDLHIPRSIRSIVCLNLPSFSGGLNPWGKPNRKKSIYRDLTLPYVDDGLFEVVGFRDAWHGLVLLAPNGHGTRLAQTSRIRFEFHKGAADCTFMRIDGEPWKQPLPKDDDTVVVEISHHGQVSMLATQLCRSKSMYDPSSPSVDREEDDSTDEELEEDCEERRKFGAADTFKYPDGIDISQVS* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1260 520 SMART dagk_c4b_2 267 437 IPR000756 GO:0004143|GO:0007205
Vra2g1260 520 Pfam Diacylglycerol kinase accessory domain 265 437 IPR000756 GO:0004143|GO:0007205
Vra2g1260 520 Gene3D - 264 443 - -
Vra2g1260 520 Gene3D - 72 214 IPR017438 -
Vra2g1260 520 PANTHER DIACYLGLYCEROL KINASE 43 518 IPR037607 GO:0004143|GO:0007165
Vra2g1260 520 PANTHER DIACYLGLYCEROL KINASE 43 518 - -
Vra2g1260 520 MobiDBLite consensus disorder prediction 471 504 - -
Vra2g1260 520 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 70 441 IPR016064 -
Vra2g1260 520 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 68 221 IPR001206 GO:0016301
Vra2g1260 520 SMART dagk_c4a_7 72 215 IPR001206 GO:0016301
Vra2g1260 520 Pfam Diacylglycerol kinase catalytic domain 72 197 IPR001206 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1260 Vra-Chr2 18238325 18245587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1260 46 512 Acyl Lipid Metabolism Gene Families AT2G20900 71.548 0.0 689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1260 2 18238325 18245587 Vra2g1260 2 18238325 18245587 ECH