Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1259 ATGACAATCGAACCCTTGGATTTGCTTCGCTCCAATCTCGCTCGGGTACGGATCCCCGAACCGACCAATCGCATCTACAAGCACGAATGTTGTGTGTCCTTCGACACTCCGAGGTCGGAAGGTGGTTTGTTCATCGACATGTGCACTTTTCTTGCTTTTGGGAAGGATTTTGTTGGTTGGAATTACGAGAAGACCGGAAATCCTGTCTATTTGCATATAAAGCAGACTAAGAAGTTAGTTCCAGAAGACAGACCTTCTAAGAAACCTACCCTCTTGGCTATTGGTATTGACGGGGGATTTGATAATAATGAGCCCGAGTATGAGGAAACTCATAGTGTAGTTATATTACCTGAGTATGTTTCTCTTCCATTCCCTTCTGTGGAATTGCCAGAGAAGGTAAGGTTGGCAGTTGATGCTATCTTACTAGCTGAGGGTGCTGAACGAAAGGAGGAACTTGCAGCCTGGACTGCTGATAAAAAACAAGTTAGTTCCTATGCAATGAATTTACAACAGATTGACAATGGTGTTGTTATTCCGCCATCTGGGTGGAAATGTGCTAAATGTGACAAGACAGAGAATCTTTGGCTAAACTTGACCGATGGAATGATACTTTGTGGGAGGAAAAACTGGGATGGAACTGGAGGGAACAACCATGCTGTTGAGCATTACCGGGAGACAGGCTACCCTCTTGCTGTAAAGCTTGGGACTGTCACTGCTGATTTGGAAGCGGCAGATGTTTTCTCCTATCCAGAGGATGAAAGTGTCTTGGATCCACAACTAGCCCAACATCTGGCTTTTTTTGGCATTGACTTTTCATCGCTACAAAAGACTGAAATGACAACTGCTGAAAGAGAACTCGATCAAAATACTAATTTTGATTGGAATCGAATACAAGAAAGTGGACAAGAAGTATATCCAATTTTTGGACCTGGATATACAGGGTTGGTCAATATTGGAAACAGTTGTTACATGGCAGCAAATATGCAAGTTGTATTTTCAACAAGATCCTTCATATCACGGTACTACTTGAGCCAAAGTCTAAAGAAGGCATTTGAGATGTCTCCTGCCGATCCAACTGTAGACCTAAATATGCAGCTGACAAAATTGGCACACGGTTTACTTTCTGGCAAATATTCTGTTCCGGCATTTGAAAATGATGAAAAAGAAAACACTGTAACTTCAACGACAACTGCTAAACAAGAAGGGATACGTCCACGGATGTTTAAATCGGTAATAGCTGCCAGCCATCCTGAATTTTCATCTACCCGGCAACAGGATGCTTTAGAATTTTTCCTACATTTTATTGATCAAGTTGAACGAGCTAATACTGGGAAAATTGAACTGGATCCATCGAGGAGTTTCAAATTTGGCATTGAAGATAGAATTTTATGTTCGTCTGGAAAAGTTACATATAATAGAAGGAATGATTACATTCTTTCTCTCAATATCCCGTTGCATGAAGCAACTAACAAAGGAGAGCTAGAATCCTTTCAAAAATTGAAAGAAGAAAGACTTGCTGAAGGAAAAGAAATAAATGCTGATGAGATTGTGCGTCCGAGGGTGCCTTTAGAAACATGCCTTGCAAACTTTTCAGCTCCTGAGGAGATACATGATTTTTACAGTACTGCTTTGAAGACAAAGACTACAGCACTGAAGACTGCAGGTCTGACCTCATTTCCTGATTACCTGGTGTTACATATGCGGAGATTTGTTATGGAGGCAGGATGGGTGCCCAAAAAACTTGATGTGTATATTGATGTTCCTGATATCATAGATATCAGTCATATGCGCAGCAAAGGTCACCAGCCTGGGGAGGAGCTGTTACCTGATGGAGTTCCTGATGAGGAAGATTCAAACAAAACGTGGGCAAATGAAGAAATTGTAGCCCAGCTGGTTTCCATGGGTTTTAATCATCTCCATTGTCAGAAAGCTGCCATAAATACATCGAATGTTGGATTAGAAGAGGCAATGAATTGGTTGCTATCTCACATGGAAGATCCAGATATTGACCTTCCTATTTCCAAAGGTCATGGCTCTGAAACTTCGACAATCGTTGACCAATCAAAAGTTGATACTCTAATTTCATTTGGATTTCAAGAAGAAATTGCTAGAAAGGCTCTGGAGGCTTCCGGTGGTGACATTGAGAAAGCGACGGATTGGATATTTAACAACCCTAATGCATCAGTCTCCAGTATGGATGCTACCCCATCCACTGCTGCATCCACGTCCAATGATGTTGACCTACCTGATGGAGGAGGGAAATATCGACTTATGGGGATTGTAAGCCACAGCGGAACCTCTACGCTTTGTGGTCACTATGTTGCTCACGTATTAAAAGATGGTAGATGGGTAATTTTCAACGACAACAAGGTTGGGGCTTCCATTAATCCTCCAAAGGAAATGGGCTATCTTTATTTCTTCGAGAGGCTTTAA 2433 0.418 MTIEPLDLLRSNLARVRIPEPTNRIYKHECCVSFDTPRSEGGLFIDMCTFLAFGKDFVGWNYEKTGNPVYLHIKQTKKLVPEDRPSKKPTLLAIGIDGGFDNNEPEYEETHSVVILPEYVSLPFPSVELPEKVRLAVDAILLAEGAERKEELAAWTADKKQVSSYAMNLQQIDNGVVIPPSGWKCAKCDKTENLWLNLTDGMILCGRKNWDGTGGNNHAVEHYRETGYPLAVKLGTVTADLEAADVFSYPEDESVLDPQLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNRIQESGQEVYPIFGPGYTGLVNIGNSCYMAANMQVVFSTRSFISRYYLSQSLKKAFEMSPADPTVDLNMQLTKLAHGLLSGKYSVPAFENDEKENTVTSTTTAKQEGIRPRMFKSVIAASHPEFSSTRQQDALEFFLHFIDQVERANTGKIELDPSRSFKFGIEDRILCSSGKVTYNRRNDYILSLNIPLHEATNKGELESFQKLKEERLAEGKEINADEIVRPRVPLETCLANFSAPEEIHDFYSTALKTKTTALKTAGLTSFPDYLVLHMRRFVMEAGWVPKKLDVYIDVPDIIDISHMRSKGHQPGEELLPDGVPDEEDSNKTWANEEIVAQLVSMGFNHLHCQKAAINTSNVGLEEAMNWLLSHMEDPDIDLPISKGHGSETSTIVDQSKVDTLISFGFQEEIARKALEASGGDIEKATDWIFNNPNASVSSMDATPSTAASTSNDVDLPDGGGKYRLMGIVSHSGTSTLCGHYVAHVLKDGRWVIFNDNKVGASINPPKEMGYLYFFERL* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1259 810 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 755 773 IPR018200 GO:0004843|GO:0006511
Vra2g1259 810 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 15 810 - -
Vra2g1259 810 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 622 663 IPR015940 -
Vra2g1259 810 MobiDBLite consensus disorder prediction 598 618 - -
Vra2g1259 810 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 112 IPR013083 -
Vra2g1259 810 CDD UBA2_atUBP14 688 725 - -
Vra2g1259 810 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 314 329 IPR018200 GO:0004843|GO:0006511
Vra2g1259 810 Gene3D Cysteine proteinases 306 810 - -
Vra2g1259 810 PIRSF UBP 8 810 IPR016652 GO:0004843|GO:0016579
Vra2g1259 810 SUPERFAMILY UBA-like 681 726 IPR009060 GO:0005515
Vra2g1259 810 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 313 810 IPR028889 -
Vra2g1259 810 ProSiteProfiles Zinc finger UBP-type profile. 161 271 IPR001607 GO:0008270
Vra2g1259 810 Pfam Variant UBP zinc finger 16 78 IPR041432 -
Vra2g1259 810 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 15 810 - -
Vra2g1259 810 Gene3D - 679 742 - -
Vra2g1259 810 SUPERFAMILY Cysteine proteinases 309 809 IPR038765 -
Vra2g1259 810 SMART uba_6 686 723 IPR015940 -
Vra2g1259 810 SMART uba_6 624 662 IPR015940 -
Vra2g1259 810 CDD Peptidase_C19B 314 808 - -
Vra2g1259 810 CDD UBA1_atUBP14 624 668 - -
Vra2g1259 810 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 684 724 IPR015940 -
Vra2g1259 810 Pfam UBA/TS-N domain 686 721 IPR015940 -
Vra2g1259 810 Pfam UBA/TS-N domain 624 660 IPR015940 -
Vra2g1259 810 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 258 IPR013083 -
Vra2g1259 810 SUPERFAMILY RING/U-box 163 271 - -
Vra2g1259 810 SMART Zf_UBP_1 184 239 IPR001607 GO:0008270
Vra2g1259 810 Pfam Zn-finger in ubiquitin-hydrolases and other protein 185 259 IPR001607 GO:0008270
Vra2g1259 810 Gene3D - 610 678 - -
Vra2g1259 810 Pfam Ubiquitin carboxyl-terminal hydrolase 313 807 IPR001394 GO:0004843|GO:0016579