Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1249 ATGGGGGAATCACAGAACCACCATCTCCTTCACCAAGCACCAACACCGTCTAGATCGGCCATGAGAGCCGGCGCCGGCGGGGGCGAGATCGTCGAGGTGCAAGGCGGCCACATTGTCCGCTCCACCGGGCGGAAGGACCGTCACAGCAAGGTCTGCACTGCCAAAGGCCCCAGAGACCGCCGTGTGCGCCTTGCAGCTCACACGGCCATCCAATTCTACGATGTCCAGGACCGCCTCGGCTATGACCGCCCCAGCAAGGCGGTGGACTGGCTCATAAAAAAAGCCAAGACCGCCATCGACGAGCTCGCGGAGCTCCCTCCATGGAACCCCACGGCCACGTCAATGCAACCGCCGCAGCAGCAGGAAATCGCCCTCCGCGAGAACAAGTCTCTCCCTGCCGAACAAGACCCGACAGCGTTCGGCAACCGTGGCGAGAGCAACGTTGTCGTCGCCGCTACCAGAGTTCCGGAGCAATTCTCTCACCAACAGTTGGAGAGTGAAAATGCTAACATTGGCACCAGCAAGTACACCAGTGGTCCTGGTTTTCTGCCACCGTCTTTGGATACTGATAACATTGCTGAGACAATCAAGACTTTCTTTCCCGTCGAAGCTACCACGACGTCGTTTCAGAGTTACCCTCCGGCGCCACCGGATTTGAGGCAGCAAGATCTGCGTTTGTCGTTGCAGTCCTTTCAGGACCCTATCATGCTTCAGCATCAGCCTCAGAGCCACAACGAGCCGGTGCTATTCGCCGGAACGGCGCTCGGCTTCGACGGCGGTTCCGCCTGGTCGGAGCACCAGAACCACCACTCGGAGGAGCACAGGTTGCTCTTTGGTGGCAACAGTGGCCATGGCGGTGGGTTTGTGTTCAACACGCCGGCGCCGGCGTTTGGCCAATTTTTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACCCCTTCGGTTCGTGCTTGGATAGACCCTTCGGTCGATCACCACCATCACAACCATCACTACTTCTCGCCGCTGATCCACCAGGGCTCCGTCGCCGGCGGCTTCTCCAACGGCGGTGGATTCTCTGGCTTTCGCATTCCAGCACGAATTCAGGGTGAAGAGGAGCACGACGGCGTATCCGACAAGCCGTCCTCTGCTTCCTCAGATTCTCGCCATTGA 1152 0.5911 MGESQNHHLLHQAPTPSRSAMRAGAGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTAIDELAELPPWNPTATSMQPPQQQEIALRENKSLPAEQDPTAFGNRGESNVVVAATRVPEQFSHQQLESENANIGTSKYTSGPGFLPPSLDTDNIAETIKTFFPVEATTTSFQSYPPAPPDLRQQDLRLSLQSFQDPIMLQHQPQSHNEPVLFAGTALGFDGGSAWSEHQNHHSEEHRLLFGGNSGHGGGFVFNTPAPAFGQFFSQRGPLQSSNTPSVRAWIDPSVDHHHHNHHYFSPLIHQGSVAGGFSNGGGFSGFRIPARIQGEEEHDGVSDKPSSASSDSRH* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1249 383 MobiDBLite consensus disorder prediction 1 24 - -
Vra2g1249 383 Pfam TCP family transcription factor 43 157 IPR017887 -
Vra2g1249 383 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 383 IPR005333 GO:0003700
Vra2g1249 383 MobiDBLite consensus disorder prediction 360 383 - -
Vra2g1249 383 ProSiteProfiles TCP domain profile. 44 102 IPR017887 -
Vra2g1249 383 PANTHER TRANSCRIPTION FACTOR TCP4 1 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1249 Vra-Chr2 17914349 17917064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1249 18 383 TCP Transcription Factor Family AT1G53230 50.251 1.75e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vra2g1249 TCP 2.7e-32 No_clan