Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1234 ATGATGGGGTCCTTTCACGTGGAGAAGAAATGGCAATTTCCTCTCATTATGATCTCATTTGTGTTCATATTCTTTCTAGCCACTTGCTTCAACATGGGGCTTGTTTCTACAATTCACAGCTTCAATTCAATATTATTCTTTCTTCCATCTCGCCTAGCCATAAACCAATCTGCTCCAGTTTTTGTGGAGACAAAGATTTCTTCTACAGCTCCAGCTCCTACTGTGCTTGCAATTCCTCGCTTTGCTTATTTGATTTCTGGCTCAAAAACTGACTTGGATAAGCTTTGGAGAACTCTTCTTGCCCTTTACCATCCCCTGAACCATTATATTGTTCATTTGGACCTTGAGTCACCACTAGAGGTGAGGTTGGAGCTTGCTTCTAGAATTGAGAAACAGCCTATTTTCTCTGAGGTTGGGAATGTTTTCATGATTCAGAAAGCTAATATGGTCACTTACAGAGGACCAACCATGATTTCTCACACTCTTCATGCTTGTGCCATTCTGCTCAAGAGAACTAAAGACTGGGATTGGTTTATTAACCTTAGTGCTTCAGATTACCCTCTCGTGACTCAGGATGATCTTCTATATACTTTTTCTGGTGTAGACAGAAGCCTTAACTTCATTGAGCACACAAGTCATTTGGGATGGAAGCAGGAAAAACGAGCAATGCCTTTAATTATCGATCCAGGTCTTTACAGGAGAAACAAGTCTGATGTTTTTTGGGTTGGTCCTAAGAGAACTTTGCCAACAGCATTTAAATTATTTACTGGTTCAGCATGGATGGTTTTATCACGCTCCTTTGTAGAATATGTTGTGTGGGGTTGGGATAATCTTCCAAGGACCCTTCTTATGTACTACACTAATTTCATCTCCTCCCCTGAAGGCTACTTTCAGACTGTGGTGTGCAATGAGCCAGAACTAGCCAAAACTGTTGTGAACAGTGACTTGCATTATATTTCATGGGACAATCCCCCCAAACAGCACCCTCATGTCCTTACAATCAATGATACAAACAAGATGATTGCAAGCAAAGCTGCCTTTGCAAGGAAATTCAAGCACAATGATCCAGTCTTAGATGAGATTGATAAACAATTACTACATAGGGAAAAGGAACAACTATTCACCCCAGGTGGTTGGTGTTCTGGCAATCCGACATGTTCAAAGGTTGGCAACATTTACAAGCTTACACCTGGTCCTGGATATCTAAGGCTGCGGTTCCTTGTAACTAGGCTAACTTGGATGGCTAAATTTGGTCAGAAACAGTGTAAATAG 1272 0.4112 MMGSFHVEKKWQFPLIMISFVFIFFLATCFNMGLVSTIHSFNSILFFLPSRLAINQSAPVFVETKISSTAPAPTVLAIPRFAYLISGSKTDLDKLWRTLLALYHPLNHYIVHLDLESPLEVRLELASRIEKQPIFSEVGNVFMIQKANMVTYRGPTMISHTLHACAILLKRTKDWDWFINLSASDYPLVTQDDLLYTFSGVDRSLNFIEHTSHLGWKQEKRAMPLIIDPGLYRRNKSDVFWVGPKRTLPTAFKLFTGSAWMVLSRSFVEYVVWGWDNLPRTLLMYYTNFISSPEGYFQTVVCNEPELAKTVVNSDLHYISWDNPPKQHPHVLTINDTNKMIASKAAFARKFKHNDPVLDEIDKQLLHREKEQLFTPGGWCSGNPTCSKVGNIYKLTPGPGYLRLRFLVTRLTWMAKFGQKQCK* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1234 423 Pfam Core-2/I-Branching enzyme 81 340 IPR003406 GO:0016020|GO:0016757
Vra2g1234 423 PANTHER OS01G0201100 PROTEIN 5 423 - -
Vra2g1234 423 PANTHER GLYCOSYLTRANSFERASE 5 423 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1234 Vra-Chr2 17403944 17408077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1234 2 423 Glycosyltransferase AT3G15350 67.217 0.0 608