Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1231 ATGTCGTCCTTCACCGTCGCCGATTCTGACACTCCCCCCTCACTCACCTCGACACCATCGAAGACCCCGTCGTCGAAGGCCAGGAGCCGGCGGAGCCAGGCGGAGTCGAAGTCTCGGTTCGAGGCGTACAACCGGCTACAGGCCGCGGCTGTGGCATTCAGCGAGACGATGCCGATCCCGGAGATCGTGGCGGTCGGGGGCCAGTCAGACGGGAAGAGCTCGCTCTTGGAGGCGCTCCTCGGGTTCCGATTCAACGTGCGCGAGGTCGAGATGGGCACTCGCAGACCCCTCATACTCCAGATGGTTCACGACGCCTCCGCCCTCGAACCCCGATGCCGCTTCCAGGAGGAGGATTCAGAAGAGTATGGAAGTCCCTTAGTTTTGGCATCCGCGATTGCTGACGTTATAAAGTCCAGAACTGACGCACTTTTGAAGAAAACCAAGGCTGCAGTTTCTTCTAAGCCAATTGTAATGAGAGCCGAGTATGCACATTGTCCTAACCTTACTATTATTGACACACCTGGGTTTGTTCTTAAGGCAAAGAAGGGTGAACCAGAGAACACACCCGATGAAATCCTTTCCATGGTGAAGTCCTTGGCTAGTCCTCCTCATCGAATTCTTTTGTTCCTTCAGCAAAGTAGCGTTGAGTGGTGCTCCTCATTGTGGTTGGATGCCATTCGCGAAATTGACCCAACATATAGACGGACAGTGATTGTTGTCTCCAAATTTGATAACCGTCTAAAGGAATTTAGTGACCGGTGGGAAGTGGATCGCTATTTGAGTGCGAGTGGTTACCTTGGAGATAGCACTCACCCCTTTTTTGTGGCACTTCCAAAGGATAGGGGTAGTGTTTCAAATGATGAGTTTCGGAGGCAGATTTCTCAGGTGGACTCAGAGGTTGTTCGTCATCTGCGTGAGGGTGTAAAGGGAGGTTTCGATGAAGAAAAATTCAAATCCTATATTGGCTTTGGCCGTTTGAGAGATTATTTGGAGTCGGAGCTTCAGAAGAAATACAAAGAAGCCGCCCCAGCAACGCTTGCTTTGCTAGAACAACGCTGCAGTGAAGTGACTTCTGAACTTGCTAGAATGGATTCGAAAATACAGGCCACCTCAGATGTTTCCCATCTCAGGAAATTTGCAATGATGCATGTGGCTTCTATCAGCAACCATGTGGGTGCATTGATCGATGGTGCTGCAGATCCTTCCCCTGAGCAGTGGGGGAAAACAACAGTTGAAGAGAGGTCACAAAGTGGTATTGGGGTTTGGCCTGGTGTCGTTGCCTCTGTAAATCCTCCCAATGCTACTCTTCGTCTTTATGGAGGAGCTGCATTTGAGAGGGTGATGCATGAATTTCGCTGTGCAGCTTATTCCATAGAATGCCCCTCGGTGTCGAGGGAGAAGGTTGCAAATATATTACTCGCCCATGCTGGTCGAGGTGTGGGAAGAGCAAGAACAGAGGCTGCCGCAGAGATTGCTCGAGCGGCTGCTAAATCATGGCTTGCTCCTCTTCTTGACACTGCTTGTGACCGACTTGCTTTTGTCTTGGGAAGTTTATTTGATTTGGCTTTAGAAAGAAACCGTATTCAAGATTTAGAATGTGAGATTAAAGGGGGAAACATGGATGGCTATATAGGTTTCCATGCTGCTTTAAGATGTGCTTACAATCGCTTCATAGGGAATCTTGCCAAGCATTGCAAGCAGCTTGTAAGGCACCACCTTGATTCAGCTACTAGTCCATACTCACAGGTCTGCTACTTCAATGACTATGCACCCTCTTATAACAAATTCAGCCAGGCTTCAGCCTCTTCGTTTTTCCTTGAGCTAAGTGATACTGGTTCAGCTTCTCACGATACAAGGAGGGATCAGGAAAATATACCTCCAGAAAACAATGCACAAGAAACCACACCAGGTGATGCAGCATGCGGGGTGGTTAAAAAGGAGCTTGGAATTTGCAATGACGTGGGACCAAGAAAGAGAGCGTCCAGAATGGGAGGGAATTACAAAAATTCTGACTATGTTGCGCTGCAAAATGGTGGCGTTTTATTTGGAAATGGAGAGAGATCAAGTTCAGCTTACTCGGATATCTGTATATCAGCTGCTCAGCATTTTGCTCGTATTCGTGAAGTTCTTGTGGAGAGAGGCGTGACATCAACATTAAATTCTGGATTTCTAACCCCTTGCCGAGATCGGATATTCGTGGCTCTTGGGTTGGATTTATTTGCTGTAAACGATGAGAAATTCATGGACATGTTTGTAGCTCCTGGGGCCATAGATGTGCTACAAAGTGAACGAGAGTCTCTCATGAAGCGTCAGAAGATGCTCCAATCTTGCTTGAATGAATTTAAAAGTGTTGCTCAGGCACTATGA 2367 0.4812 MSSFTVADSDTPPSLTSTPSKTPSSKARSRRSQAESKSRFEAYNRLQAAAVAFSETMPIPEIVAVGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLILQMVHDASALEPRCRFQEEDSEEYGSPLVLASAIADVIKSRTDALLKKTKAAVSSKPIVMRAEYAHCPNLTIIDTPGFVLKAKKGEPENTPDEILSMVKSLASPPHRILLFLQQSSVEWCSSLWLDAIREIDPTYRRTVIVVSKFDNRLKEFSDRWEVDRYLSASGYLGDSTHPFFVALPKDRGSVSNDEFRRQISQVDSEVVRHLREGVKGGFDEEKFKSYIGFGRLRDYLESELQKKYKEAAPATLALLEQRCSEVTSELARMDSKIQATSDVSHLRKFAMMHVASISNHVGALIDGAADPSPEQWGKTTVEERSQSGIGVWPGVVASVNPPNATLRLYGGAAFERVMHEFRCAAYSIECPSVSREKVANILLAHAGRGVGRARTEAAAEIARAAAKSWLAPLLDTACDRLAFVLGSLFDLALERNRIQDLECEIKGGNMDGYIGFHAALRCAYNRFIGNLAKHCKQLVRHHLDSATSPYSQVCYFNDYAPSYNKFSQASASSFFLELSDTGSASHDTRRDQENIPPENNAQETTPGDAACGVVKKELGICNDVGPRKRASRMGGNYKNSDYVALQNGGVLFGNGERSSSAYSDICISAAQHFARIREVLVERGVTSTLNSGFLTPCRDRIFVALGLDLFAVNDEKFMDMFVAPGAIDVLQSERESLMKRQKMLQSCLNEFKSVAQAL* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1231 788 Pfam Dynamin family 62 242 IPR045063 -
Vra2g1231 788 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 56 343 IPR030381 GO:0005525
Vra2g1231 788 MobiDBLite consensus disorder prediction 613 637 - -
Vra2g1231 788 Coils Coil 346 366 - -
Vra2g1231 788 Gene3D - 26 396 IPR027417 -
Vra2g1231 788 PANTHER DYNAMIN 36 787 IPR022812 -
Vra2g1231 788 PANTHER DYNAMIN-LIKE PROTEIN C 36 787 - -
Vra2g1231 788 MobiDBLite consensus disorder prediction 1 27 - -
Vra2g1231 788 CDD DLP_1 58 343 IPR001401 GO:0003924|GO:0005525
Vra2g1231 788 MobiDBLite consensus disorder prediction 1 39 - -
Vra2g1231 788 PRINTS Dynamin signature 59 77 IPR022812 -
Vra2g1231 788 PRINTS Dynamin signature 84 101 IPR022812 -
Vra2g1231 788 PRINTS Dynamin signature 162 179 IPR022812 -
Vra2g1231 788 PRINTS Dynamin signature 231 247 IPR022812 -
Vra2g1231 788 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 351 IPR027417 -
Vra2g1231 788 SMART dynamin_3 36 272 IPR001401 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1231 Vra-Chr2 17326655 17332275 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1231 2 17326655 17332275 Vra2g1231 2 17326655 17332275 ECH