Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1213 ATGCCTTCTTCTCCCAAATCCTATGCCCTCCCCTACGGCCGCCACCCCTCGCCCTTCGTCGCGCGTAGATCCACCCTCTCCCTCCTCCTCATCTCCGTTCTCATCATCCTCTTCCTCTTCGCCATCGTCCCCTACCTAACCCAGATTCGCCACAGTGGCTGTGCCGACGTGCACCCCCGATCGGTGCGCGTCGTCTGGGAGCACGCCGGCAACGCGAACGCTGCTGTCGGTGTTGGAGATGGAGAGAGGCACAAGGTGATGGGGTTTGTGGGCGTTCAAACGGGATTTGGATCCGCTGGGAGAAGAGAGGCGTTAAGGAAGACGTGGTTTCCCTCTGATCGCCAAGGCCTTCAACGCTTGGAAGAAGCCACTGGGTTGGCATTTAGGTTTATCATTGGTAGAACAAGTGACAGAGGAAAGATGTCCGCACTTCATAAGGAAGTAGCAGAATATGATGATTTCATTTTGTTGGATATCCAAGAGGAGTACAGTAAGCTCCCATACAAAACGTTAGCTTTCTTCAAAGCTGCTTATGCTCTTTTTGATGCTGAATTTTATGTCAAAGCTGATGATGACATATATTTAAGGCCAGATCGTCTATCATTGCTACTGGCCAAAGAACGATCTCATCCTCAGACATACATAGGATGTATGAAAAAAGGACCTGTTTTCACTGATCCAAAACTCAAATGGTATGAGCCTTTGTCTAATTTGCTTGGAAAGGAGTATTTTCTTCATGCCTATGGTCCTATTTATGCTCTTTCTGCTGATGTTGTCTCAAGCTTGGTTGCTCTTAGGAATGACAGTTTCCGAATGTTCAGCAATGAGGATGTTACTATTGGAGCTTGGATGCTAGCTATGAACGTCAACCATGAGAATAATCATGAACTTTGTGCTACAGACTGCACAGCCACATCTGTTGCTGTGTGGGATATTCCAAAGTGTTCAGGTCTCTGCAATCCAGAAAAGAAAATGTTGGAACTCCATCAAAAGGAGACCTGCTCTAAGACCCCAACTCTGGAATCAGATGATGAATAG 1038 0.473 MPSSPKSYALPYGRHPSPFVARRSTLSLLLISVLIILFLFAIVPYLTQIRHSGCADVHPRSVRVVWEHAGNANAAVGVGDGERHKVMGFVGVQTGFGSAGRREALRKTWFPSDRQGLQRLEEATGLAFRFIIGRTSDRGKMSALHKEVAEYDDFILLDIQEEYSKLPYKTLAFFKAAYALFDAEFYVKADDDIYLRPDRLSLLLAKERSHPQTYIGCMKKGPVFTDPKLKWYEPLSNLLGKEYFLHAYGPIYALSADVVSSLVALRNDSFRMFSNEDVTIGAWMLAMNVNHENNHELCATDCTATSVAVWDIPKCSGLCNPEKKMLELHQKETCSKTPTLESDDE* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1213 345 PANTHER HEXOSYLTRANSFERASE 3 336 - -
Vra2g1213 345 Pfam Galactosyltransferase 101 294 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vra2g1213 345 Gene3D - 89 329 - -
Vra2g1213 345 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 3 336 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1213 Vra-Chr2 16865369 16872206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1213 17 345 Glycosyltransferase AT1G53290 71.940 0.0 507
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1213 2 16865369 16872206 Vra2g1213 2 16865369 16872206 ECH
Vra5g2813 5 35716179 35721435 Vra2g1213 2 16865369 16872206 PCT