Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g0222 ATGGAGATATCGAAAGCGATGGACGCTCTCCGAGAGAGAGCGACGTTCGTAAAGGAATCACTTCACAAGAGCCAGACCATCACCGATAACATGGTCTCCATTCTCGGTTCCTTCGATCATCGTCTCTCCGCACTCGAGACCGCCATGCGTCCCACTCAGATAAAAACGCATTCAATTCGTAGTGCACACGATAACATTGACAAGACTCTAAAAGCAGCAGAGGTGATTTTGGCGCAATTCGACCAGACACGAATGGCGGAGGCTAAAATACTTCGAGGGCCGCACGAGGATCTAGAAAGCTATTTAGGAGCAATTGATCAGTTGAGGGCAAATGTTCGTTTTTTTAGTAGTAAAAAGAGCTTCAAAAGTAGCGAGGCTATCGTCACCCATGCTAATACCTTGCTTGCCAAAGCTATCGCAAAGTTAGAAGAGGAATTCAAACATCTTTTGACAAATTATAGTAAACCAGTGGAACCAGATCGGCTTTTTGAGTGCCTACCAAACTCCCTAAGGCCCTCAAATTCTGGGAAGCAAAGTGAGGGTGGTGGAAGAAACCACTCCGGAAAACAAAGTTCAGAAGCTGTCACTTTCGCACTTCCAACTCTCATTCCACCGAGAGTCATACCTTTGCTTCATGATTTAACACAACAAATGGTTCAAGCTGGTCATCAACAACAACTTTTTCGAATATACAGAGAAACCCGAGCGGCAGTCCTGGAACAAAGTCTCAGGAAGTTAGGTGTCGAAAGGTTGAGTAAGGATGACGTTCAGAGAATGCAATGGGAGGTTTTGGAGGCAAAGATTGGCAATTGGATTCATTACATGAGGATTGCTGTCAAATTGTTGATTGCTGGAGAGAAGAAAATTTGTGATCAAATATTTGATGGTGTGGACTCTTTGAAATCTCAATGTTTTGCTGAAGTCACTGCTAGTAGTGTGGCTATGCTTCTTAGTTTTGGAGAGGCTGTTGCAAAAAGTAAGAGGTCACCTGAGAAATTATTTGTTCTTCTAGACATGTATGAGATAATGAGAGAACTTCAACCAGAGATTGAGAGACTTTTTGAAAGTAAAGCATGCACTGAAATGAGAGAAGCTGCAATAAATTTGTCAACGAGATTAGCTCAAACTGCCCAAGAAACCTTTGTTGATTTTGAGGAAGCAGTTGAAAAAGATGCCACTAAAACTACTGTAATGGATGGAACTGTCCACCCTTTAACAAGCTACGTGATCAATTACGTAAAGTTTCTGTATGATTATCAATCAACCTTGAAACTACTTTTTCGTGAGTTTGATCCGAATGACCCGGACGGACAATTAGCAATTATTACAACAAGGATTATGCAGGCTCTCCAAACTAACTTGGATGGAAAATCAAAACAATATAAAGATCCAGCACTGACCCAGTTGTTTCTAATGAATAACATCCATTACATAGTGAGATCTGTGAGAAGGTCAGAGGCAAAGGACATGTTAGGAGATGATTGGGTGCAAATACATAGAAGAATTGTGCAACAACATGCAAATCAGTATAAAAGGATTTCTTGGGCAAAGATTTTACAATGCCTCACTGTCCCAGCAAGTGAAAACAATAATGCAGTCACAAGAACAATGATTAAAGATAGATTCAAGACATTTAACGATCAAATTGAAGAGCTTCATCAACGGCAATCTCAATGGACTGTTCCCGACAGTGAATTGCGTGAATCTCTCAGATTGGCTGTTGCTGAAGTGTTGTTGCCCGCATATAGATCTTTCCTAAAACGTTTTGGGCCCGTGATAGAGAACGGCAAAAATCCTTATAAGTACATGGTATATTCTCCCGAACATCTTGAGCAAATGCTGGGTGAATTTTTTGAAAGCAAGATATGGGGTGAACCAAAGCGATAA 1887 0.4118 MEISKAMDALRERATFVKESLHKSQTITDNMVSILGSFDHRLSALETAMRPTQIKTHSIRSAHDNIDKTLKAAEVILAQFDQTRMAEAKILRGPHEDLESYLGAIDQLRANVRFFSSKKSFKSSEAIVTHANTLLAKAIAKLEEEFKHLLTNYSKPVEPDRLFECLPNSLRPSNSGKQSEGGGRNHSGKQSSEAVTFALPTLIPPRVIPLLHDLTQQMVQAGHQQQLFRIYRETRAAVLEQSLRKLGVERLSKDDVQRMQWEVLEAKIGNWIHYMRIAVKLLIAGEKKICDQIFDGVDSLKSQCFAEVTASSVAMLLSFGEAVAKSKRSPEKLFVLLDMYEIMRELQPEIERLFESKACTEMREAAINLSTRLAQTAQETFVDFEEAVEKDATKTTVMDGTVHPLTSYVINYVKFLYDYQSTLKLLFREFDPNDPDGQLAIITTRIMQALQTNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRSEAKDMLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVPASENNNAVTRTMIKDRFKTFNDQIEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFLKRFGPVIENGKNPYKYMVYSPEHLEQMLGEFFESKIWGEPKR* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g0222 628 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 36 623 - -
Vra1g0222 628 MobiDBLite consensus disorder prediction 165 190 - -
Vra1g0222 628 MobiDBLite consensus disorder prediction 168 190 - -
Vra1g0222 628 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 623 IPR004140 GO:0000145|GO:0006887
Vra1g0222 628 Gene3D Exocyst complex component Exo70 74 628 - -
Vra1g0222 628 Pfam Exo70 exocyst complex subunit 270 615 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vra1g0222 628 SUPERFAMILY Cullin repeat-like 76 619 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g0222 Vra-Chr1 2762264 2768975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra1g0222 1 628 EXO70 exocyst subunit family AT5G52340 77.725 0.0 1026
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g0222 K07195 - gmx:100779774 1150.96