Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1445 ATGGCGGCGAGAAACGTTTCTTTGAGGCAGATATTCGCGGAGAGGAGTAAGGAGAGGCTTCTCTCGCGGAAGGATTTTTCAGAGCTGAGACTGAACGGCAGCAACAGCAACAGCGGCGTTGCTCGTCACGCGCTCTCGGATCGCGTGGTTAGGTTCTGCAATGGGTTTTTAGAGTTCTTTGGGCAGCTTCGGGATATGGCGCGATCGGATCGAAGGAAAGTGGTTTTTGCGGCAAAGGCGGGGCTGTCGTTGGCTGTGGTTTCGCTGTTCATTTACATAAAGGAGGAACAGCTGAGCAAGTATTCCATCTGGGCCATTCTCACCGTCGTTGTCGTTTTCGAATTCAGCGTAGGTGCAACTTTAAATAAAGGATTCAATCGTTCACTGGGAACGATTTCCGCTGGAGGGCTTGCCCTCGGTATCGCTGAATTGGCCGTACTGTCCGGAAAGTTCGAGGAACTTATTATAGTACTCTCTATATTTATTGCAGGATTTTGTGCAAGTTATGTGAAGTTGCTGCCTGCAATGAAGACATATGAATATGGCTTTCGGGTGTTTTTGTTGACGTTTTGTATTGTATTGGTATCTGGGAGAACTAGCAGGGAATTTTTCTCCACAGCCTTTTACAGATTAATTCTTATTGCAATTGGTGCTGGCATATGTTTGTTTGTAAATATTTTCATATACCCCATCTGGTCTGGAGAGGATCTGCATAAATTGGTGGTGAAAAATTTCAATGGAGTTGCTGCATCTTTAGAAGGCTGTGTCAATGGGTACCTACAATGTGTTGCATATGAGAGGGTACCTTCAAAAATTCTTGTTTATCAAGCCTCAGATGATCCACTCTACCGTGGCTATAGAGCAGCAGTTCAATCGTCAAGTCAAGAGGATGCTTTGGTAGATTTTGCATTATGGGAGCCACCTCATGGTCCATACAAGACATTCAATTATCCTTGGAGAAGCTATGTGCAAGTCAGTGGAGCTTTGAGGCATTGTGCTTTCATGGTTATGGCAATGCATGGATGCATACTTTCAGAAATTCAGGCACCTCCAGAAAAAAGGCTGGTTTTCAGTAACGAACTTCAGAGGGTTGGCACTGAAGGAGCTAAAGTATTGCGTCAACTTGGAAGCAAAGTGGAAAAGATGGAAAAGCTGAGCCATATTGATATACTCTTGAACGTGCATGATGCAGCTGAGCAATTGCAGATGAAGATTGACCAACAGTCATTCCTCTTAGTCAATTCAGAAAGCTGGCAAGCTTCAAAAAAGCCTAAGGAAGTTGAGAGTCATGACAATTTGATTGATCTTAAAGACCATGAAAACAAACACTCACTCATCTCTTCCTTAAGTGAAACAGGGGCTGACTCAAGACTCAACATAGGTATAGAGTCTTCAGTTCCTGAATTGCACGTTTCACAAAGCATGATGTGCAAGAAAATATCTTGGCCACGCCTCTCATTTTTAGGAGATAACATGTTACTTGAGCAAGATTCCAAAGTATATGAAAGTGCAAGCTCTTTGTCTTTGGCAACCTTTGCTTCCCTTTTAATAGAGTTTGTTGCGAGGCTTCAAAATCTTGTGGATGAATTCCAAGATCTCAGTGAGAAGGCCAATTTCAAGGACCCTTTTGACCAAACAATATTAAAGTAG 1650 0.4321 MAARNVSLRQIFAERSKERLLSRKDFSELRLNGSNSNSGVARHALSDRVVRFCNGFLEFFGQLRDMARSDRRKVVFAAKAGLSLAVVSLFIYIKEEQLSKYSIWAILTVVVVFEFSVGATLNKGFNRSLGTISAGGLALGIAELAVLSGKFEELIIVLSIFIAGFCASYVKLLPAMKTYEYGFRVFLLTFCIVLVSGRTSREFFSTAFYRLILIAIGAGICLFVNIFIYPIWSGEDLHKLVVKNFNGVAASLEGCVNGYLQCVAYERVPSKILVYQASDDPLYRGYRAAVQSSSQEDALVDFALWEPPHGPYKTFNYPWRSYVQVSGALRHCAFMVMAMHGCILSEIQAPPEKRLVFSNELQRVGTEGAKVLRQLGSKVEKMEKLSHIDILLNVHDAAEQLQMKIDQQSFLLVNSESWQASKKPKEVESHDNLIDLKDHENKHSLISSLSETGADSRLNIGIESSVPELHVSQSMMCKKISWPRLSFLGDNMLLEQDSKVYESASSLSLATFASLLIEFVARLQNLVDEFQDLSEKANFKDPFDQTILK* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1445 549 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 6 546 - -
Vra11g1445 549 Coils Coil 516 536 - -
Vra11g1445 549 Pfam Aluminium activated malate transporter 65 534 IPR020966 GO:0015743
Vra11g1445 549 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 4-RELATED 6 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1445 Vra-Chr11 17630353 17635142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1445 13 546 Miscellaneous Gene Families AT1G25480 61.717 0.0 657
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1445 11 17630353 17635142 Vra11g1445 11 17630353 17635142 ECH