Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1435 ATGTACAACGCATATGTTAGCCCAACAGTATATGCTGTTAGGTGTAGAGAAACTTTCTCATTATCTTTCAATGGCTACTCAAACTTCTGTCACGAAAGATTTGATGGAACCCCATCATACTGTTTGTCATGTTGTGGTTGTTGTGATTGTTGTTCAGCTTCCACATACAGAGTACCTGTAAAGTCTTGTCTTGTAAATGGGTTGAGGCAATCTGCTCTTCTTCAATTGTCAGCAACTAGAAGGTTGATACTGGGTGGGGGAGATCATTACCTTTCCCGGCTGCCAGCTTATGGTTTCCTCAGAGATTGTCAGGAGCTTAACTCTTCTGTCAATGAGAAAACTATTTGCAATATTAGTAGGCGGAGCATAAAGGGAAGATGTATTCGTGTTACCTCACAAAAAGGTAGAAATTTTTCTCATTCATTTGGTCCTGATGATGTCGAAGCAGTTCTGAGCTTGTTGAATGAGGAGGCAGATAGGGAAGCTACCATCTGTAGCAAATGTAAGGATGTGTTTTCATCCAAAAGAATGGAAGCTGAGAAAGCAAGAAAAAGTATTAGGAGAGAGGGACATTTGAATTCATGTGAGAAAGTAAAATCAGAGAAAGCGGGAAATTTGAAGCAACATCAATCATCCACCATAGAATTGAGAAGAGAATATGAAAAACCTAACAAAGAAAGGGAAGACTTTGCAAAAAGTGAAAACCATAGGAAACGAAGAAATGTATCTAGTGGTTCATCTTATTATTCTCTCTCATCAGGAGATTTTGGAAGTGAGCTGGAAGCTCAGGATGAGATTGGTTTGGAAGAATTGTCACTCGAATATGAGAAGGGCAAAGCAAATGGTGTGGAGGAACAAGTGAAGGAACAACTTAAGGAAGAATTCAAGGGGCAAGGGGATGACTCAAAGAAGCTGTTGGGTGTTTCAAATAAGGATAAATTTGCATCTGGTGAGGATATTGATTGGAACCTAAGGAAGAAGACTGAAAAGAAGCTGACTCAGGGAACTCTGCAAAACACAGAATCCACAAGGGAACAACAGGATGTGTATTTGGGAGGATTTAAAACACATGAATCTGGTCATGAAAGATTGTCCGTTTCACAAGACCAAGTCAATAGTGAGGAAGATAAATCATCTTTTGTTGACTATTTGGATAAGAAAACAAACAAGTTATATCTTCAAACTGTCAATAGAAGAAAACATCAATCAATAGATGTACAAGAGTCTGATTGTAATGAAGTTGAGAAAAGTTCGTTATCACAAAAGGAGTTGAGTGGCAGGGAAGGGAAGCTTGAGATATCAGAAATATCGTTGAAGAAAACAACTGATGAACGTGAAAAGATTGTTGGTTCCACTTCTACCACTGCAAACGAAATTTTGAAATCAAAGAAGGCATTCAGTGGCAGGGAAGGGAGCCTTGCAATATCAGAAACGCTATTACAAGAAACAAATGATACTTATAAAAAAAGTGTTGGTTCTAGTTCTACCTCTCACAAGGATTTGATGGATAGAAGTTCCCTCAAATATACTGGGAATTTAAGAATTGAAGACAGTGAACGGACTTCCAATACCAAGATGAAGGGCATGGAAATGAAAAATGTTTTGAGTTCTGTTCAGGGAGTAGTAGAGGAGCAGCAACACCAAAAAGGAGAGAAGATCATTACACAAGCTAATGTTGAAGATACGTCTATCCTGAAGTCTAGAACCAGATTAAAGAACATGGAAGAAAATTTGAACATAAGCTCAGATTCAAGGGGTACATGGCTTCAAACAGATAAAAGGACAACTCAGAGTTTCCAGCACAGGAAAGGATCTGAATTTGTCGGCATTTTATCAGAAGGCTATGCCAGTGATGAAAAACAAGTTTTAAGTTCTCAAAAAGCTCATGAGAAGGTGAAATTCATTTCAAAAAGTAAACCTACATCAGTTGTTAGAACAAGAGAAAGTTCTAGCCAAACTGATGGATCGATTGCAAATCTATCAATTTCTGATGAAACCACCTCAAGAGAGGAATCCAGTTTGCAGGGGTCATTGAATTTGGTTTCTGGGTATGGAAAACATGTTATGTTGGAAGCAGGTGAAGAAGGGGGCTCTGCAACAATGTTGATCCCTTCCTCTTCAGAAGTGGGTGGAGGCTCAGCACATGTTGAACTCACTGCAGGAATTGCAAACCCAAATGTCTTCCTTGAAACTTCGAAAAGTGGATCTTCTGCTTTGTCTGATAATTCAGGAAGAAGTTCTGCTTTGCATCCAGATGCTCTTGGTTCAGCTAATCTTTCAGAGAAATCATCTAGGCAGTTTGTCGACGAGTTTGCTGAGAGGATCAGGCATGAAGTAACAACTTCTAAAGCACAAGAGATGGAAGTTGCAGGACCAAGGTTGACACTTGAAGTTGGTGGTAATCAGATCTACAACACAAGGCAACAAGGAACTAAAACAGATGTTCAGTCAAAGGAGCATGATTCTAGTCGTTCCTCTGGGTTTCCTGGGACCAAAGGTCCTTCTGATGAGATTTGGGATGTCTCTGAACCATCTATTGAACAAGGTCTAGTAGCCAGAGAAACAGAGACCAGCAAAGAAACTGGGAAAACGGTCATTGGTAGAACTGGGAGGTCTTTATGGGGTATAATTTCTGATATTGTTCGATTACGTTGGGGTTCACGTGCTGGTTCCTCCACATCAGCTGGAAAATCTGCTGAGAGAAACTCACCAAACAAGTCCGAAAGTGACACATGGTTTTCTGGACAGGAGCATGAGGAAACCACTAAAACTAATGTCGTAGATGAAACAAGTGTACTGCCTCAAGCCATGATTTCTGATAAGTTAAAACTAGGTAGTCATTCTCACAATAAACTGAAGGACAAAGGAAAACATCTTGAAATTGGATCGTCATCACCGAACACATTGGAAAGTGGATCAGTGTCAGTAGGTGCCTCTTATACTTCTGGAGAGGAAAATGCTAGTTGGAATGAAGATAATAAAGATTTGAAAGCCACTAATTCTGGCACACAAAACATGGAATTACCGATTTCAATACCTGCAAGAGGGCCTCCTATTGCTGGAGAAATTGTAAGCATTGGTGGATCTGACATGTCTGGAGGAGCTGAGTTAGTGGGGCCAGTCAAGGATTTTGTTGCTCCTTTGCAGTCTGAGTTGTCTGGCTCAGAGAGAAAGGATGGAGAGTTAAAGCAAAGGAAGCTTCAACGGAACAAGCAAGTCTTAAGAGATAGGTTTGATGACTGGGAAGAAGCCTATCAACGTGAACTTGAACAGCGGAAAATAGATGAAATGTTCATGAAGGAAGCACTTTTGGAAGCTAAGAAGGCTGCTGATACATGGGAGGTTCCTGTTGGTGCTGTTCTAGTGCAGCATGGGAAAATTATTGCTCGAGGGTGCAACTTAGTGGAAGAATTACGGGACTCCACTGCTCATGCAGAGATGATTTGTATACGAGAAGCTTCAAACCTTCTTCGGACATGGAGACTATCTGGCACCACACTTTATGTAACGCTTGAACCATGTCCTATGTGTGCTGGTGCTATCCTTCAGGCAAGAATAGACACTCTTGTATGGGGTGCTCCCAATAAGCTTCTTGGAGCTGATGGTAGCTGGATTAGGCTTTTCCCGGACGGAGGAGAAAATGCATCATCAGAACCAAGAGATGTGCCACCTGCCCCAGTTCATCCATTCCATCCAAAGATGAAAATAAGAAGAGGGGTCTTAGCCACAGAGTGTGCAGATGCAATGCAGCAATTCTTTCAGCTAAGAAGGAAAACGAAGAAAGAGGAAACCCCAAAGGACCCTTCTTGTCTCCCTGTTTCTCACCACCACCCTTCCAAAATACTCAACAAGATACATGACGTTTTCCACATAATGTTCTGTTTATAA 3888 0.4097 MYNAYVSPTVYAVRCRETFSLSFNGYSNFCHERFDGTPSYCLSCCGCCDCCSASTYRVPVKSCLVNGLRQSALLQLSATRRLILGGGDHYLSRLPAYGFLRDCQELNSSVNEKTICNISRRSIKGRCIRVTSQKGRNFSHSFGPDDVEAVLSLLNEEADREATICSKCKDVFSSKRMEAEKARKSIRREGHLNSCEKVKSEKAGNLKQHQSSTIELRREYEKPNKEREDFAKSENHRKRRNVSSGSSYYSLSSGDFGSELEAQDEIGLEELSLEYEKGKANGVEEQVKEQLKEEFKGQGDDSKKLLGVSNKDKFASGEDIDWNLRKKTEKKLTQGTLQNTESTREQQDVYLGGFKTHESGHERLSVSQDQVNSEEDKSSFVDYLDKKTNKLYLQTVNRRKHQSIDVQESDCNEVEKSSLSQKELSGREGKLEISEISLKKTTDEREKIVGSTSTTANEILKSKKAFSGREGSLAISETLLQETNDTYKKSVGSSSTSHKDLMDRSSLKYTGNLRIEDSERTSNTKMKGMEMKNVLSSVQGVVEEQQHQKGEKIITQANVEDTSILKSRTRLKNMEENLNISSDSRGTWLQTDKRTTQSFQHRKGSEFVGILSEGYASDEKQVLSSQKAHEKVKFISKSKPTSVVRTRESSSQTDGSIANLSISDETTSREESSLQGSLNLVSGYGKHVMLEAGEEGGSATMLIPSSSEVGGGSAHVELTAGIANPNVFLETSKSGSSALSDNSGRSSALHPDALGSANLSEKSSRQFVDEFAERIRHEVTTSKAQEMEVAGPRLTLEVGGNQIYNTRQQGTKTDVQSKEHDSSRSSGFPGTKGPSDEIWDVSEPSIEQGLVARETETSKETGKTVIGRTGRSLWGIISDIVRLRWGSRAGSSTSAGKSAERNSPNKSESDTWFSGQEHEETTKTNVVDETSVLPQAMISDKLKLGSHSHNKLKDKGKHLEIGSSSPNTLESGSVSVGASYTSGEENASWNEDNKDLKATNSGTQNMELPISIPARGPPIAGEIVSIGGSDMSGGAELVGPVKDFVAPLQSELSGSERKDGELKQRKLQRNKQVLRDRFDDWEEAYQRELEQRKIDEMFMKEALLEAKKAADTWEVPVGAVLVQHGKIIARGCNLVEELRDSTAHAEMICIREASNLLRTWRLSGTTLYVTLEPCPMCAGAILQARIDTLVWGAPNKLLGADGSWIRLFPDGGENASSEPRDVPPAPVHPFHPKMKIRRGVLATECADAMQQFFQLRRKTKKEETPKDPSCLPVSHHHPSKILNKIHDVFHIMFCL* 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1435 1295 MobiDBLite consensus disorder prediction 637 674 - -
Vra11g1435 1295 Hamap tRNA-specific adenosine deaminase [tadA]. 1099 1257 IPR028883 GO:0002100|GO:0008251
Vra11g1435 1295 MobiDBLite consensus disorder prediction 219 241 - -
Vra11g1435 1295 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1093 1215 IPR002125 -
Vra11g1435 1295 MobiDBLite consensus disorder prediction 360 379 - -
Vra11g1435 1295 MobiDBLite consensus disorder prediction 732 749 - -
Vra11g1435 1295 Gene3D Cytidine Deaminase, domain 2 1083 1269 - -
Vra11g1435 1295 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 848 1285 - -
Vra11g1435 1295 MobiDBLite consensus disorder prediction 732 763 - -
Vra11g1435 1295 Pfam MafB19-like deaminase 1096 1195 IPR028883 GO:0002100|GO:0008251
Vra11g1435 1295 MobiDBLite consensus disorder prediction 800 843 - -
Vra11g1435 1295 MobiDBLite consensus disorder prediction 961 1001 - -
Vra11g1435 1295 MobiDBLite consensus disorder prediction 639 674 - -
Vra11g1435 1295 PANTHER TRNA(ADENINE(34)) DEAMINASE, CHLOROPLASTIC 848 1285 - -
Vra11g1435 1295 Coils Coil 1064 1091 - -
Vra11g1435 1295 SUPERFAMILY Cytidine deaminase-like 1091 1261 IPR016193 GO:0003824
Vra11g1435 1295 MobiDBLite consensus disorder prediction 957 1001 - -
Vra11g1435 1295 MobiDBLite consensus disorder prediction 888 930 - -
Vra11g1435 1295 CDD nucleoside_deaminase 1099 1206 - -
Vra11g1435 1295 MobiDBLite consensus disorder prediction 219 249 - -
Vra11g1435 1295 MobiDBLite consensus disorder prediction 888 911 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1435 Vra-Chr11 17482596 17490517 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1435 11 17482596 17490517 Vra11g1435 11 17482596 17490517 ECH