Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1431 ATGATGCCCCATCAGCAAGAAAACGCTGTTACACCTGACAATCCAGCAATCCCCCACCGCCCAGAGAACCGCTCCGTCCACGCCGAACCACCGTCGTCCGCTGCCAATCACATTCGTAACGCCAATAATTCTCACCAACACCCACAACCAAATATTTCACCGCCCAGATTTTCTGTTCTTCGTCAATCCCTTCCCCCAGTTACCCTCAAATTTGAGGATGTTACCTACAGCATAACTTTTGAAAGGGACAAGAATGGTTGCGTATCTTCTCCAAAACCAAAACACAAAAGGACAGTGTTGAATGGTGTGACTGGTATGGTGGGGCCAGGGGAGGTGATGGCAATGTTGGGGCCATCAGGTAGTGGCAAGACCACTTTACTCACTGCCCTCGCCGGCCGGCTCACCGGAAAACTATCCGGTGCCGTAACGTATAACAACCACCCTTTCTCAAGCTCCATGAGGCGCAACATAGGTTTTGTGTCCCAAGAAGATGTGTTGTACCCTCACCTCACTGTGATTGAGACTCTAACTTATGCTGCCATGTTGAAGCTTCCGAGAAGTTTGACAAGGGAAGAGAAAATGGACCAAGCTGAGATGATCATCCAGGAGCTAGGGTTGTCACGGTGCCGAAACAACCTTGTTGGTGGTGGCGCAGCCGTTTTCCGGGGGATTTCCGGCGGGGAGCGAAAGCGGGTCAACATAGGACAAGAGATGTTGGTAAACCCGAGTTTGTTGTTGCTCGATGAGCCGACATCCGGGTTGGACTCCACCACCGCCCAACGCATCGTGGCAATGCTTCATAGTCTTGCTCGAAGCGGTCGAACGGTGGTGACCACCATTCACCAACCTTCGAGCAGGTTGTTTTGGATGTTTGACAAGGTGTTGTTGTTGTCGGACGGGTACCCGCTTTTCACCGGACAAGCATGTCGGGCCATGAATTATTTTGAGTCCATCGGGTTTGGGCCCACTTTCAATTTCATCAACCCAGCTGATTTTCTGCTTGACCTTGCTAATGGTATAGTTGTTGATGTCAAAGAAGAAGAACATTTAGATCGTCTTGAGGATCAAGCTTCAATCAAACAATTTCTAGTTTCATCGTATAAGAAGAATGCATATCCTCTTCTAAAACAAGAGATTCAACAAAATCAGGGAGAAGTAGCATCTTTTGCTTCAAGAACATTGAGTCCTGAGAATCAATGGACCACTAGCTGGTGGGAACAATCCATGGTTCTACTCAAGAGAGGTTTAAAAGAGAGGAGACATGAATCTTACTCTCATCTTAGAATTTTTCAAGTCTTGTCTGTCTCAATTCTCTCAGGACTTCTATGGTGGCATTCTAATCCCTCACATATACAAGATCAGGTAGGTTTGCTGTTCTTCTTTTCCATCTTCTGGGGTTTCTTTCCTCTCTTCAATGCCATTTTTGCTTTTCCTCTGGATCGAGCAATGTTGATAAAAGAAAGATCGTCAGGCATGTACCATTTATCCTCGTATTATGTTGCTAGGACAGTTGGGGACTTACCAATGGAGCTTGTGCTTCCTACTATATTTGTGACAATATCTTATTGGATGGGAGGTTTGAAGCCTTCCTTAGTTACATTTGTGTTAACTTTATTGATCATGCTTTTGAATGTGTTAGTTTCTCAAGGAACAGGCCTTGCACTTGGGGCCATTCTAATGGATGCCAAACAAGCGACAACCTTAGCCTCAGTGACTATGTTAGTGTTTCTCTTGGCTGGGGGTTACTACATTCAACAAATTCCATTCTTTATATCTTGGTTGAAGTATATCTCTTTCAGTCACTATTGCTATAAGCTTCTTGTAGGAGTACAATACTCAGTAAATGAGGTTTATGAGTGTGAAGCAGCAGCAGGGTTACATTGTAAGATTAGAGATTTTCCTGCCATAAAGTGTTTAGGACTTGATAATTTCTGGAAAGATGTGCTTGTTTTGACTATCATGTTGATTGGATATAGAGTTCTGGCATATCTAGCTTTGAGGAAAAGCTGCTCCATCATTGATTAG 2025 0.4474 MMPHQQENAVTPDNPAIPHRPENRSVHAEPPSSAANHIRNANNSHQHPQPNISPPRFSVLRQSLPPVTLKFEDVTYSITFERDKNGCVSSPKPKHKRTVLNGVTGMVGPGEVMAMLGPSGSGKTTLLTALAGRLTGKLSGAVTYNNHPFSSSMRRNIGFVSQEDVLYPHLTVIETLTYAAMLKLPRSLTREEKMDQAEMIIQELGLSRCRNNLVGGGAAVFRGISGGERKRVNIGQEMLVNPSLLLLDEPTSGLDSTTAQRIVAMLHSLARSGRTVVTTIHQPSSRLFWMFDKVLLLSDGYPLFTGQACRAMNYFESIGFGPTFNFINPADFLLDLANGIVVDVKEEEHLDRLEDQASIKQFLVSSYKKNAYPLLKQEIQQNQGEVASFASRTLSPENQWTTSWWEQSMVLLKRGLKERRHESYSHLRIFQVLSVSILSGLLWWHSNPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLDRAMLIKERSSGMYHLSSYYVARTVGDLPMELVLPTIFVTISYWMGGLKPSLVTFVLTLLIMLLNVLVSQGTGLALGAILMDAKQATTLASVTMLVFLLAGGYYIQQIPFFISWLKYISFSHYCYKLLVGVQYSVNEVYECEAAAGLHCKIRDFPAIKCLGLDNFWKDVLVLTIMLIGYRVLAYLALRKSCSIID* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1431 674 MobiDBLite consensus disorder prediction 35 58 - -
Vra11g1431 674 Pfam ABC transporter 100 252 IPR003439 GO:0005524
Vra11g1431 674 ProSitePatterns ABC transporters family signature. 224 238 IPR017871 GO:0005524
Vra11g1431 674 Pfam ABC-2 type transporter 407 612 IPR013525 GO:0016020|GO:0140359
Vra11g1431 674 SMART AAA_5 109 302 IPR003593 -
Vra11g1431 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 316 IPR027417 -
Vra11g1431 674 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 38 669 - -
Vra11g1431 674 CDD ABCG_EPDR 66 306 - -
Vra11g1431 674 MobiDBLite consensus disorder prediction 1 58 - -
Vra11g1431 674 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 38 669 - -
Vra11g1431 674 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 69 324 IPR003439 GO:0005524
Vra11g1431 674 Pfam ABC-2 type transporter 281 389 IPR043926 GO:0140359
Vra11g1431 674 Gene3D - 72 317 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1431 Vra-Chr11 17432666 17436172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1431 84 285 Calmodulin-binding Proteins AT2G36910 30.516 2.37e-11 65.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1431 11 17432666 17436172 Vra11g1431 11 17432666 17436172 ECH