Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1430 ATGACAGACATCACTGACGACATAGCGGAGGAAATTTCCTTCCAAGGCTTCGACGATGACTGCAATATGCTCGGAAGCCTTCTCAACGACATTTTGCAAAGAGAGGCTGGCCCAACCTTTGTTGACAAGCTTGAAAAAATTCGAGTCCTTGCTCAGAGTGCTTGTAATATGAGACATGCGGGGATTGAAAACATGGCTGAGCTGCTAGAGAAGCAATTGGCTTCAGAGTTATCCAAGATGACACTAGAAGAAGCTCTCACACTTGCTCGTGCCTTTAGCCATCATCTTACTTTGATGGGTATTGCTGAAACTCACCATAGGGTTCGCAAAGGAGGAAACATAGCTCTTTTTGCAAAATCTTGTGATGACATCTTTAACCAGCTGTTGCAAGATGGATTTACTCCAGAGGAGCTTTATAACTCGGTTTGCAAGCAGGAGGTCGAAATTGTTCTCACAGCTCACCCCACTCAAATTAATCGTCGTACCTTGCAATACAAACACATTAAAATTGCTCATCTTTTGGATTATAATGATCGACCTGATCTTGGCCATGAAGACCGAGATATGTTGATTGAAGATCTGGTGAGAGAGATAACTTCAATATGGCTGACAGATGAACTTAGGCGTGAGAAACCCACACCAGTTGATGAAGCCAGGGCCGGGTTGAATATTGTGGAGCAATCACTCTGGAAAGCTGTTCCTCATTATTTACGTCGAGTTAGCATCGCTTTAAAGAAGCACACAGGAAAACCACTTCCATTGACTTGCACACCAATAAAGTTTGGATCTTGGATGGGAGGTGATAGAGATGGAAACCCAAATGTGACAGCTAAGGTCTCAAAAGATGTTTCACTTCTGTCTAGATGGATGGCAATTGACCTCTACGTTCGGGAAGTGGATAGCCTGAAATTTGAGTTATCCATGAAACGGTGCAGCGATAAGTTGTCGAAATTGGCACATGAAATTCTAGAAGAAGCTAACAATGAGGAGAATCGCCGTGAGCATTGGAATGAATCTAGGAGTATAAGTCAATTCAAATATTCTAATCAACAAGCTTCACCACTTCCAACTAAACTTCCACCTGGAGCTCATTTACCGTCTTGTGCTGAAAAAGGTGGATCTGAGCATCCAAGACTCATTCCAGGAGCTGATCACAAGCAATTCAATCCCAAGGGTGGCGAGATTTCAAGTTCCACTGAGAGCACTATGTGCAGTACCAATGTCCGTTCACCAAAACTAATGTCACCAAGTTCCAGTGTTGCTTCATTAGCTTCAATGTCACGCTCTCCTTCTTTCAACTCTAGTCAACAACTTCTTGCTCAGAGGAAATTGTTTGCAGAATCCCAGATAGGAAGGACCAGTTTCCATAGGCTTTTGGAGCCAAAGCTCCCTCAGCATCCTACAATCGCTCCTTATAGAGTTGTTCTTGGAAATGTAAAAGATAAGCTTCTGAGAACTCGTAGACGGTTGGAGCTTCTTCTCGAGGATGGTCCATGTGAACAAAATCCTATGAATTATTATGAAACAACAGATCAGCTCTTGGAACCTTTGCTCCTTTGCTATGAATCTTTGCAATCATGTGGATCTGGGGTGCTAGCTGATGGTCGACTTGCTGATCTGATAAGAAGAGTCGCTACTTTTGGCATGGTGTTAATGAAGCTTGACTTGCGCCAGGAATCAGGCAGACATGCTGAAACGCTTGATGCAGTTACAAGGTATTTGGACTTGGGTAAATACAGTGAGTGGGATGAAGAAAAGAAACTGAACTTCTTAACTAGAGAGCTGAAAGGGAAAAGACCACTGGTTCCCCCTAGTATAGAGGTTGTTCCAGATGTTAGAGAAGTCTTGGACACGTTCCGAACCGCTGCTGAGTTAGGAAGCGATTCATTTGGTGCCTATGTGATCTCTATGGCCTCAAATGCCAGTGATGTTCTTGCAGTAGAGCTTTTGCAGAAGGATGCACGACTTGCTGTCAGTGGAGAGTTAGGAAGAGCTTGCCCAGGTGGAACGCTGCGGGTGGTTCCTCTATTTGAAACTGTAAAGGACCTAAGAGGAGCTGGTTCAGTTATCAGAAAGCTTTTGTCAATAGATTGGTACCGACAACACATCATTAAAAACCATAATGGGCATCAAGAGGTTATGGTTGGGTATTCTGATTCTGGTAAAGATGCTGGGCGCTTCACTGCTGCTTGGGAACTTTACAAAGCTCAAGAAGATGTTGTAGCTGCATGCAAGGAGTATGGAATTAAGGTTACTCTCTTCCATGGCCGTGGAGGGAGTATTGGTCGCGGTGGTGGTCCAACATATATGGCCATTCAGTCTCAACCACCTGGCTCTGTGATGGGAACCCTTCGTACAACAGAGCAAGGAGAGATGGTGCAGGCCAAGTTTGGCTTGCCACAAACAGCTGTTAGGCAACTTGAGATCTACACAACAGCTGTGTTACTTGCTACCCTTCGTCCTCCTCTCCCACCGCGTGAAGAAAAGTGGCGCAATATGATGGAAGAGATTTCAAAGCTCAGTTGCCAATGTTACCGTAGTGTAGTGTATGAAAATCCAGAATTTCTGTCATACTTCCATGAAGCCACCCCTCAATCAGAGCTTGGCTTCCTCAACATCGGTAGCCGTCCCACAAGGCGAAAGAGCACCACCGGAATTGGACACCTCCGTGCCATTCCCTGGGTGTTTGCATGGACTCAAACTAGGTTTGTTCTTCCAGCTTGGCTTGGAGTTGGAGCAGGGTTGAAAGGTGCTTGTGAGAAAGGACAAACTGAAGAGCTAAAGGCCATGTACAAAGAGTGGCCTTTCTTTCAAAGCACCATAGACTTGATTGAGATGGTTCTGGGAAAAGCAGACATTCCTATTGCAAGGCACTATGATGAAGTTCTTGTCTCAGAGAAGAGACAACAAATTGGAGGTCAACTGAGGGATGAACTCGTCCAAACTGGCAAGTTTGTGTTAGCTGTTAGTGGGCATGAGAAACCTCAGCAGAATAATAGGAGCTTGAGGAAACTGATTGAGAGTAGGCTTCCCTTCCTCAATCCCTTGAACATGTTGCAGGTAGAGATACTCAAGAGGTTAAGGAGTGATGATGACAACCTTAAAGCAAGAGATGCCTTGCTCATCACCATAAATGGCATTGCTGCTGGGATGAGGAACACTGGTTAA 3168 0.4479 MTDITDDIAEEISFQGFDDDCNMLGSLLNDILQREAGPTFVDKLEKIRVLAQSACNMRHAGIENMAELLEKQLASELSKMTLEEALTLARAFSHHLTLMGIAETHHRVRKGGNIALFAKSCDDIFNQLLQDGFTPEELYNSVCKQEVEIVLTAHPTQINRRTLQYKHIKIAHLLDYNDRPDLGHEDRDMLIEDLVREITSIWLTDELRREKPTPVDEARAGLNIVEQSLWKAVPHYLRRVSIALKKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVSKDVSLLSRWMAIDLYVREVDSLKFELSMKRCSDKLSKLAHEILEEANNEENRREHWNESRSISQFKYSNQQASPLPTKLPPGAHLPSCAEKGGSEHPRLIPGADHKQFNPKGGEISSSTESTMCSTNVRSPKLMSPSSSVASLASMSRSPSFNSSQQLLAQRKLFAESQIGRTSFHRLLEPKLPQHPTIAPYRVVLGNVKDKLLRTRRRLELLLEDGPCEQNPMNYYETTDQLLEPLLLCYESLQSCGSGVLADGRLADLIRRVATFGMVLMKLDLRQESGRHAETLDAVTRYLDLGKYSEWDEEKKLNFLTRELKGKRPLVPPSIEVVPDVREVLDTFRTAAELGSDSFGAYVISMASNASDVLAVELLQKDARLAVSGELGRACPGGTLRVVPLFETVKDLRGAGSVIRKLLSIDWYRQHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACKEYGIKVTLFHGRGGSIGRGGGPTYMAIQSQPPGSVMGTLRTTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATLRPPLPPREEKWRNMMEEISKLSCQCYRSVVYENPEFLSYFHEATPQSELGFLNIGSRPTRRKSTTGIGHLRAIPWVFAWTQTRFVLPAWLGVGAGLKGACEKGQTEELKAMYKEWPFFQSTIDLIEMVLGKADIPIARHYDEVLVSEKRQQIGGQLRDELVQTGKFVLAVSGHEKPQQNNRSLRKLIESRLPFLNPLNMLQVEILKRLRSDDDNLKARDALLITINGIAAGMRNTG* 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1430 1055 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 18 1055 IPR015813 GO:0003824
Vra11g1430 1055 Coils Coil 312 339 - -
Vra11g1430 1055 MobiDBLite consensus disorder prediction 391 415 - -
Vra11g1430 1055 PRINTS Phosphoenolpyruvate carboxylase signature 149 162 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vra11g1430 1055 PRINTS Phosphoenolpyruvate carboxylase signature 202 218 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vra11g1430 1055 PRINTS Phosphoenolpyruvate carboxylase signature 261 276 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vra11g1430 1055 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 8 1055 - -
Vra11g1430 1055 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 1055 IPR022805 GO:0006099|GO:0008964|GO:0015977
Vra11g1430 1055 Pfam Phosphoenolpyruvate carboxylase 19 340 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vra11g1430 1055 Pfam Phosphoenolpyruvate carboxylase 459 1055 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vra11g1430 1055 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 713 725 IPR033129 -
Vra11g1430 1055 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 8 1055 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vra11g1430 1055 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 150 161 IPR018129 -
Vra11g1430 1055 Gene3D Phosphoenolpyruvate/pyruvate domain 289 351 - -
Vra11g1430 1055 Gene3D Phosphoenolpyruvate/pyruvate domain 415 549 - -
Vra11g1430 1055 MobiDBLite consensus disorder prediction 380 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1430 Vra-Chr11 17394002 17405415 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1430 11 17394002 17405415 Vra11g1430 11 17394002 17405415 ECH