Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1426 ATGTTCACTCCCCAGAAAAAGGTGTGGCCGAATGTCACTGGGTCTTTCACGCTGCACCGAGGCGGTGTTGCGATGGGTTCCGCCTCTGCAAAGGAAAAGGCAGTCGCCGACGGTCCGCCGCCGCCGCCTTTGGGGTCTCTGACCGAAACCACCGTAGCGGTGGGATTCGACACGGGTAACGCAGAGGACTGGAGGCGGTTCACGGAGTTAGGGTTGTTGGATGAAAGTGTGATGCAGAGGAAGGACCATGAAGCACTCCTGGAGAAGGTCTCCAGGCTCGAAAGAGAGCTTTTTGACTACCAGTACAACATGGGCCTGCTATTGATGGAGAAGAAAGAATGGAATTCAAAGTTTGACCAGCTGAGACAAGAACTGGCTGAAACTGAGGAGATTCTAAAACGAGAACAGTCAGCACATTTATTTGCCTTGTTTGAAGTTGAGAAGCGGGAGGAGAATTTGAGGAAAGCATTGAGCACAGAGAGGCAATGTGGGGCTGATCTTGAGAGAGCTCTGCGTGCAATGCAAGAAGAGCATGCCCAAGTCAAGTCTAACTCCCATACAAAGCTAGCTGAAGCTAGTGCGTTGGTTGATGGAATTGAAGAAAAGTCTTCAGTGGTTGACAAGAAACTGCTTGATGCAGAGGCTAAGCTGGCTGAGGTGAACAGAAAAAATGCAGAGCTGGATATGAAATTGCAAGAGGTCGAGGCTCGTGAAAGTTTGCTTCTAAAGGAGCGTTTGTCTTTAGCTACTGATCGAGAATCATTTGATGCAACATTCTATAAAGAAAGGGAAGATTTAAAGGAGTGGGAAAGGAAGCTACAGCAAAGAGAAAATATGCTATCCAGTGGTTGGCAAAATATCAGTGAGAAAGAAAAGAAGATAGTTGAAACCGAGAAGAACCTTAAACAGAAAGAAAGAGACCTGGAAGTGTTGGAGAAAAAGGTTAATTCATCTAGTTCTTTATTGAAGGAAAAGGAAGCTGAGATTATTAGAAGAATAGCCAATATAAACGTGGAAGAGAAGAAAGTGGATTCTTTGAAGAGCACGCTGGAGATGAAAGAGAAAGAATTGTTTGCATTGGAATCAAAACTTAATTCTAGAGAAAGAGAGGGGATCCAGAAGGTCCTTGGTGAACAAAAGGCTACACTGGATTTGCAGTTGCAGCAGGTTGATTTTGAAATGGAACACAAGCGGAAATCCCTTCTTGAGGAGTTTAGCAGCAAGGAGGAAGCCTTGGAGCAGAGGGAGGCTGAAGTCAACCATAGGGGAAAAAAGGTTGAAAAAGAAGAGCAAGCCTTGAGTAAGAAGGCTGAGAGAATAAAAGAACAAAGTAAGGAGATTGAAGCAAAATTGAAATCTTTAAAGGAGAAAGAAAAGACTCTGAAAATCAAGGAGAAAGAGTTGGAGAAGGAAAACCAACAATTGGTTGCTGATCGGGAGACCCTGGAGAATTTAAATGCTGAACTTCAGAGGATAAAAGCTGAGATTTCTCTGCAGGAGCTGCAAATACAACAAGAGACTGAGAATTTGAAGCTTGCTGAGGATGATAGGTTAGAGAATTCTCGATTGCGATTGGAATTGAAACAGGAGATAGAGCATACCAGATTGCAGAAGGACTCTCTTGTGAAGGAAGCTGAAAACTTAAGGGAGGAGAGAGAGAGGTTTGAGAAAGAGTGGGAAGTACTAGATGAAAAGAGAGAAGAAATTACTAGGAAGCAGCATGATATTGATGTGGAGAAAGAAAGTTTAAGAAAATTTCAGCACAGTGAAGAAGAAAGATTGAAAAGCGAGAAACAAAGTATGCAAGAACAAAGAAAGAAGGAGCTGGAGAAGCTTGAATTGGAGAAGGAATCATTTAGAGATTCAATGAATCAAGAGAAACACCTGTTGTCTGAAAAGGTGAAAAATGAACAGGCTAAAATGCTTCAAGATTTTGAATCAAAGATGAGGAATCTTGAGAATGAAATCCAGAAAAGACAGGAAGAAATGGAGGAAGATTTGCAGGAAAGAGAGAGAAATTTTCAGGAGAAAATGCAAAGAGAACTTGACAATATTAACATATTGAAGAATCTTTCTGAGAGAGAATGGGAAGAAGCAAAGGCTGAGGGGATTAGATTAGAAAATGAAAGGAAGGAACTTGAATTGAACAAGCAGCAATTTCAGTCAGGCCAACTTGAGATGCGTGAAGATTCTGAAATGCTTATGAATCTCAGTCAGAAAGTTAAGAAAGAACGTCAACGGCTTGTGGCTGAAAGAAAAAATTTTCTTGAACTTGTTGAGAATTTGAAGAATTGCAAGGTCTGTGGTGAATTTGTTGGGAACTTTGTTTTATCTGATACTAAACTATCTGACTTGAAGGAAAGTGTGGCCATTCCTTTGCCTATTTCCCCTGTTCTGAATTATAAGTCTCCTGACTCCCAGGACATTGTAGCTACATCTGACATTGACAATTCTGGATCTGTAAGACCTGTGTCTTGGTTCCACAAATGCACATCCAAGTTTTTCAAACTGTCCCCAACTAAAAGAGCTGAAGCTATTAGTGCTTCAGACATGGCTGGGACATCACCCTCAGATGTGAATGATGGTGTAGACAAAGCAGATGAGCCTGCATCTCTTCCTAATATAGAAGGAGCTAGAGTTAGTCTTGATGAACGTCAACCAGCAGTTGGGATGGCATATCACTCTCTAGATACACCACACCTCCAATCTGATAACATTGATAAAGAGGTTGGGGATGAACACTCCCTATCCATAGGTGAGCACAGCAGGGTTGATAGTGTGGTTGATGGAGATCGAGATGATTCTCAACAGTCTGTTCCAAAGCTTCACAGGGCCAGACCTGGGAGGAAAAGCAAATCTGGAATTGCTAGAACACGCTCAGTGAAGGCTGTTGTTGAAGAGGCCAGAGAGTTTCTAGCCAAAGAAAACAGTCCAGAAGACTCCAGTCGCATTGAGAAAGCCAACACTGGAAGGAAGCGTCAACGGGCACAAACTTCTAGAGTTACAGAAAGTGAACAGACTGCTGGTGATAGTGAAGGGCAATCAGAGAGTATTACAGCTGGTGGACGCAGGAAGAAGAGGCAAACAGTTGCTCCGCCAGCTCATGTTACTGGGGAGAAACGATACAATCTTAGGCAGCACAAGACTGCGGGCAAAGGTTCATCAAAACAGGCCTTACGAAATGCAACAAGAAGTGTGGGGAAAGAGGCTGTGGTGGAGGGGCAGATGAGACCCGAAGTTGTTGAAACCTCATTAGCAGCTGATGACAATGTACAAGTACAAGACAAAAGCATGGTGCAGGTCACAACAACAAAAACTGTGGAGGTCTCAGATGAAAGAGTTGTTAGGTTTGAAGTACCAAGAGATATTGTTGATGACAATGGTGCTGCAGAGGAAAATGGTACATCAGAATATCGAGACGAAGATGGAAGCACAATCCATGATGTTGAAAATGATGATGATGATTACGAAGATGAGGATGAGGAACATCTGGGTGAGGTGTCCACCGTAAAGAAGATCTTCAGATTTTTTACAACGTGA 3540 0.4291 MFTPQKKVWPNVTGSFTLHRGGVAMGSASAKEKAVADGPPPPPLGSLTETTVAVGFDTGNAEDWRRFTELGLLDESVMQRKDHEALLEKVSRLERELFDYQYNMGLLLMEKKEWNSKFDQLRQELAETEEILKREQSAHLFALFEVEKREENLRKALSTERQCGADLERALRAMQEEHAQVKSNSHTKLAEASALVDGIEEKSSVVDKKLLDAEAKLAEVNRKNAELDMKLQEVEARESLLLKERLSLATDRESFDATFYKEREDLKEWERKLQQRENMLSSGWQNISEKEKKIVETEKNLKQKERDLEVLEKKVNSSSSLLKEKEAEIIRRIANINVEEKKVDSLKSTLEMKEKELFALESKLNSREREGIQKVLGEQKATLDLQLQQVDFEMEHKRKSLLEEFSSKEEALEQREAEVNHRGKKVEKEEQALSKKAERIKEQSKEIEAKLKSLKEKEKTLKIKEKELEKENQQLVADRETLENLNAELQRIKAEISLQELQIQQETENLKLAEDDRLENSRLRLELKQEIEHTRLQKDSLVKEAENLREERERFEKEWEVLDEKREEITRKQHDIDVEKESLRKFQHSEEERLKSEKQSMQEQRKKELEKLELEKESFRDSMNQEKHLLSEKVKNEQAKMLQDFESKMRNLENEIQKRQEEMEEDLQERERNFQEKMQRELDNINILKNLSEREWEEAKAEGIRLENERKELELNKQQFQSGQLEMREDSEMLMNLSQKVKKERQRLVAERKNFLELVENLKNCKVCGEFVGNFVLSDTKLSDLKESVAIPLPISPVLNYKSPDSQDIVATSDIDNSGSVRPVSWFHKCTSKFFKLSPTKRAEAISASDMAGTSPSDVNDGVDKADEPASLPNIEGARVSLDERQPAVGMAYHSLDTPHLQSDNIDKEVGDEHSLSIGEHSRVDSVVDGDRDDSQQSVPKLHRARPGRKSKSGIARTRSVKAVVEEAREFLAKENSPEDSSRIEKANTGRKRQRAQTSRVTESEQTAGDSEGQSESITAGGRRKKRQTVAPPAHVTGEKRYNLRQHKTAGKGSSKQALRNATRSVGKEAVVEGQMRPEVVETSLAADDNVQVQDKSMVQVTTTKTVEVSDERVVRFEVPRDIVDDNGAAEENGTSEYRDEDGSTIHDVENDDDDYEDEDEEHLGEVSTVKKIFRFFTT* 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1426 1179 Coils Coil 398 516 - -
Vra11g1426 1179 MobiDBLite consensus disorder prediction 1000 1018 - -
Vra11g1426 1179 Coils Coil 208 237 - -
Vra11g1426 1179 MobiDBLite consensus disorder prediction 845 879 - -
Vra11g1426 1179 MobiDBLite consensus disorder prediction 1123 1164 - -
Vra11g1426 1179 MobiDBLite consensus disorder prediction 901 940 - -
Vra11g1426 1179 Coils Coil 727 754 - -
Vra11g1426 1179 PANTHER PROTEIN CROWDED NUCLEI 4 1 1179 IPR040418 GO:0005634|GO:0006997
Vra11g1426 1179 Coils Coil 336 370 - -
Vra11g1426 1179 MobiDBLite consensus disorder prediction 896 1075 - -
Vra11g1426 1179 Coils Coil 587 716 - -
Vra11g1426 1179 MobiDBLite consensus disorder prediction 1048 1062 - -
Vra11g1426 1179 MobiDBLite consensus disorder prediction 1123 1146 - -
Vra11g1426 1179 Coils Coil 111 138 - -
Vra11g1426 1179 Coils Coil 164 184 - -
Vra11g1426 1179 Coils Coil 287 328 - -
Vra11g1426 1179 Coils Coil 524 572 - -
Vra11g1426 1179 MobiDBLite consensus disorder prediction 962 999 - -
Vra11g1426 1179 MobiDBLite consensus disorder prediction 1147 1163 - -
Vra11g1426 1179 PANTHER PROTEIN CROWDED NUCLEI 3 1 1179 - -
Vra11g1426 1179 MobiDBLite consensus disorder prediction 580 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1426 Vra-Chr11 17342573 17349498 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1426 11 17342573 17349498 Vra11g1426 11 17342573 17349498 ECH