Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1421 ATGATAGTCAGGTTAGGACTCATAGTTGCTGCTTCGCTTGCAGCTTTTACTGTTAAGCAGCTGAATGTCAGAAGCTCAAATCCAGAACACAAAGATGAGGGCACAGAAGAAGAGCGTGTCACAAGATTTAATGATAAAAGGGAGGAGGAAGAGGAGAAAGAGGAGGTTAAGTTAATTAGCAGCATAATAAATCGAGCAAATGACTTTGAAGATGATATTCTACCAGAATTTGAAGATCTTCTGTCTGGGGAGATTGAGTTTCGATTACCACCAGATAAGGATGAGAAAGACAGAGTTTATGAAATTGAGATGGCAAACAACGAAAGTGAACTTGAGAGATTGCGACAGCTAGTGAAGGAATTGGAGGAGAGGGAAGTGAAACTTGAAGGAGAATTGCTTGAGTACTATGGTCTGAAGGAACAGGAATCAGACATCGTGGAGTTGCAGAGGCAACTGAAAATTAAGACTGTAGAAATAGACATGCTTAATATCACAATTAACTCCTTGCAGGCAGAGAGAAAGAAGCTCCAAGAAGAACTCACACAAGGAGGTTCAGCCAAGAGAGAACTTGAGGTGGCTAGAAACAAGATCAAGGAGCTACAGAGGCAGATACAGCTTGAGGCTAACCAAACAAAAGGCCAGTTGTTGTTGCTTAAACAACAAGTTTTGGGTCTGCAGGTTAGAGAAGAAGAGGCTGCCAGAAAAGATGCTGATCTTGAAAAGAAACTGAAAGCTGTGAATGACCTAGAGGTTGCAGTGGTGGAGCTTAAGAGAAGAAACAAAGAACTTCAACATGAAAAGCGAGAGTTGACAGTTAAACTCGATGCTGCTGAATCTAAAGTGGCTGAGCTCTCCAATATGACAGAGACTGAAATGGTTGCGAAGGCAAAAGAGGAGGTGAGTAACCTGAGGCATGCAAATGAAGACCTGCTAAAGCAAGTGGAAGGGCTGCAGATGAACAGGTTCAGTGAGGTTGAAGAGCTTGTGTACCTTCGTTGGGTCAATGCATGTTTGAGATATGAGCTAAGAAATTACCAGACACCGCAAGGGAAAGTATCAGCCCGTGATCTCAGCAAGAGTCTTAGCCCGAAATCGCAAGAGAAAGCTAAGCAACTGATGTTAGAATATGCTGGATCAGAACGTGGACAAGGGGACACAGATCTCGAAAGCAATTTCTCCCATCCTTCTTCACCAGGAAGTGAAGATTTTGACAATGCTTCCATTGATAGCTCTACTAGCAAGTACAGTACTCTTAGCAAGAAAACTAGCCTAATCCATAAGTTTAAGAAATGGGGTAAAAGCAAAGATGATTCTAGTGCTCTTTCATCACCGGCAAGATCCTTTTCAGGAGGTTCTCCAAGGAGAATGAGTATGACTGTGAAACCAAGGGGTCCACTAGAATCCTTAATGATAAGGAATGCTGGAGATAGTGTATCTATCACCAGCTTTGGGCTCAGGGATCAGGAAGCTATTGATTCTCCTGAAACTCCAACTGACATGAGAAAAGTTCCATCCACTGATTCCTTGAATTCAGTTTCTGCTTCATTCCAATTGATGTCTAAGTCAGTGGATGGATCCATGGATGAGAAGTACCCTGCGTATAAAGATCGCCACAAGTTGGCCTTGGCAAGGGAAAAACATATAAAAGAAAAAGCAGAGAAAGCAAGAGCTCAGAAGTTTGGTGATAATTCAGGTTTGAATATGACCAAGGCTGAAAGAGGAAATACTATATCTTTGCCACCCAAGCTTACTCAAATTAAGGAGAAACCAGTTGTTTCTGGCACTCCAAATGATCAATCCGAAGAAGGGAAGAATGTTGATGATCAAACTATCAGCAAGATGAAGCTTGCTGAAATTGAGAAAAGGCCTACTAGGGTGCCTAGACCTCCTCCTAAGCCATCTGGTGGTGGTGCTGCTACCACAAATGCAAATCCTGCCAATGGAGTACCATCTGCTCCTCCAATTCCTCCTCCTCCTCCAGGGGCTCCACGGCCACCACCACCGCCAGGTGGACCACCTCCACCTCCTCCTCCCCCAGGAAGCCTATCAAGAGGGGGAATGGATGGTGACAAAGTTCACAGAGCTCCACAGCTAGTTGAATTTTATCAGTCATTGATGAAGAGGGAGGCAAAGAAAGATACATCAACACTTTTAGTTTCTACAACAAGTAATGCATCTGATGCTAGGAGCAACATGATTGGGGAAATTGAGAATAGATCATCATTCCTCCTAGCTGTGAAAGCTGACGTAGAAACACAAGGTGATTTTGTCATGTCCTTGGCAGCTGAAGTTCGAGCAGCCTCCTTCTCAGATATTAATGACTTGGTGGCCTTTGTGAACTGGCTAGATGAGGAACTGTCCTTCCTGGTTGATGAACGTGCCGTCCTCAAGCACTTTGACTGGCCTGAAGGGAAAGCAGATGCACTAAGGGAGGCAGCTTTTGAATATCAGGATTTGATCAAGTTGGAGAACCGAGTCTCCACATTCATTGATGATCCCAATCTACCATGTGAAGCTGCCCTGAAGAAAATGTATTCATTGCTTGAAAAAGTGGAGCAAAGCGTATACGCACTCTTGCGGACGAGAGATATGGCTATTTCCCGGTACAAAGAGTTTGGAATCCCAGTAAACTGGCTATTGGATTCGGGAGTTGTAGGCAAGATCAAGCTTTCTTCTGTACAACTTGCACGGAAGTATATGAAACGTGTTGCATCTGAACTTGATGCATTGTCTGGTCCAGAAAAAGAACCGGCTAGAGAGTTTTTGATTCTTCAAGGCGTGCGTTTCGCTTTCCGTGTCCATCAGTTTGCAGGAGGCTTCGATGGAGAGAGTATGAAGGCTTTTGAAGACCTGAGGAGCCGCATTCAAAATTCTCAGGCGACCGAAGATAACAAACCAGAAATGTAG 2907 0.4396 MIVRLGLIVAASLAAFTVKQLNVRSSNPEHKDEGTEEERVTRFNDKREEEEEKEEVKLISSIINRANDFEDDILPEFEDLLSGEIEFRLPPDKDEKDRVYEIEMANNESELERLRQLVKELEEREVKLEGELLEYYGLKEQESDIVELQRQLKIKTVEIDMLNITINSLQAERKKLQEELTQGGSAKRELEVARNKIKELQRQIQLEANQTKGQLLLLKQQVLGLQVREEEAARKDADLEKKLKAVNDLEVAVVELKRRNKELQHEKRELTVKLDAAESKVAELSNMTETEMVAKAKEEVSNLRHANEDLLKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNYQTPQGKVSARDLSKSLSPKSQEKAKQLMLEYAGSERGQGDTDLESNFSHPSSPGSEDFDNASIDSSTSKYSTLSKKTSLIHKFKKWGKSKDDSSALSSPARSFSGGSPRRMSMTVKPRGPLESLMIRNAGDSVSITSFGLRDQEAIDSPETPTDMRKVPSTDSLNSVSASFQLMSKSVDGSMDEKYPAYKDRHKLALAREKHIKEKAEKARAQKFGDNSGLNMTKAERGNTISLPPKLTQIKEKPVVSGTPNDQSEEGKNVDDQTISKMKLAEIEKRPTRVPRPPPKPSGGGAATTNANPANGVPSAPPIPPPPPGAPRPPPPPGGPPPPPPPPGSLSRGGMDGDKVHRAPQLVEFYQSLMKREAKKDTSTLLVSTTSNASDARSNMIGEIENRSSFLLAVKADVETQGDFVMSLAAEVRAASFSDINDLVAFVNWLDEELSFLVDERAVLKHFDWPEGKADALREAAFEYQDLIKLENRVSTFIDDPNLPCEAALKKMYSLLEKVEQSVYALLRTRDMAISRYKEFGIPVNWLLDSGVVGKIKLSSVQLARKYMKRVASELDALSGPEKEPAREFLILQGVRFAFRVHQFAGGFDGESMKAFEDLRSRIQNSQATEDNKPEM* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1421 968 MobiDBLite consensus disorder prediction 434 460 - -
Vra11g1421 968 Coils Coil 138 210 - -
Vra11g1421 968 Coils Coil 239 287 - -
Vra11g1421 968 MobiDBLite consensus disorder prediction 349 412 - -
Vra11g1421 968 MobiDBLite consensus disorder prediction 562 582 - -
Vra11g1421 968 MobiDBLite consensus disorder prediction 24 48 - -
Vra11g1421 968 Coils Coil 293 320 - -
Vra11g1421 968 MobiDBLite consensus disorder prediction 552 691 - -
Vra11g1421 968 MobiDBLite consensus disorder prediction 349 367 - -
Vra11g1421 968 MobiDBLite consensus disorder prediction 25 48 - -
Vra11g1421 968 MobiDBLite consensus disorder prediction 649 682 - -
Vra11g1421 968 MobiDBLite consensus disorder prediction 601 627 - -
Vra11g1421 968 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 965 - -
Vra11g1421 968 Coils Coil 104 134 - -
Vra11g1421 968 MobiDBLite consensus disorder prediction 384 412 - -
Vra11g1421 968 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 965 IPR040265 -
Vra11g1421 968 MobiDBLite consensus disorder prediction 437 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1421 Vra-Chr11 17258202 17263629 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1421 11 17258202 17263629 Vra11g1421 11 17258202 17263629 ECH