Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1411 ATGTCTATCTTCCTCACTCTGACACTCTTGAGCAGCATCTTCGGCACCACCATTTCCACCAATCTTCCACCTTCTTTTTCATTCCCATATGGTTTGTCGTATCACATCGACTGTGGAAGTCCGACCAACACCACGGATCCGTTCAACACCACGTGGCTGTCGGACCGCTACTTCAGTGGCGGCGCTACCGGGATCGTGTCGGAGCCGCTTAACTTCCACCATGCGCACGAGAAGACTCTCCGCTTCTTCCCAATCTCCTCCGGCAAGAAGAACTGCTACGCCATCCCTTCCCTCCCTCCCTCCCGCTACCTCCTCCGCACATTCGTCGTCTACGACAACTACGACGGCAGGTCCCACCCTCCCTCCTTTGATGTCGCCATCGCCTCCACTGTCGTATTCTCCTGGCGCTCACCCTGGCCCCCGTCCCTCGCCCGCGATGGCGCCTACGCCGACCTCTTCGCTACAATCCTCTCCTCAGAAGCCCTAATTTGCTTCTACAGCCTCGCCACGGACCCGCCGGTGATCTCCTCCATCGAGCTCTTCGCAGCCGATCTGGCCTCCTACGACGCCGCCGCAATCGCCGACAACGGCACTGTGCTTGTCAACTACGGGAGACTCTCCTGCGGCTCCGACCAGTGGGGGCCGGGCTTCTCCAACGACTCCGACCTGTTCGGCCGCTCCTGGCAGTCCGATTCGGTATTCCGAACAGGCCAGAGTAAAATCGTAGCCGTATCGACGCGGAACAGCATAAGTGGGGCTGAGGAAAAGCCGAATTACTTCCCGGAGAAACTTTACCAGACGGCGGTGATGACGGCGACGACAGCAGAGGAGGGAGGTGGGGTTTTGGAGTACGAGTTGAGAGTGGACGCAAAGCTTGATTACTTGGTCTGGCTGCATTTCGCTGAGATTGAAGGGCGGGTGAGAAGGGTTGGGGGGAGGGTGTTTGATGTGTACATAAACGGTGATAATTTGACCAGGGTTGATATATACAAGCAAGTTGGGGGTTTTGCGGCGTTTACTTGGCATCACACGGTGAAAAACTTGAGTAGCAGCGTCTTGAGCGTGAAGCTAGTGGGTGTGGTGGGTGCGCCTCTGATCTGTGGGATTGAGAATTACGCTCTGGTGCCTAGTGATCCTTCAACTGTTCCTCAACAAGTGGTTGCCATGAAAGCATTGAAAGATTCACTTCGGGTGCCTGAAAGAATGGGTTGGAATGGTGATCCTTGTGCCCCTACTAATTGGGATGCTTGGGAGGGAGTTACCTGCCGTATGAGTAAAGATAATACTGCTTTGGTGATAAGTCAAATTGATTTGGGCAGTCAAGGCTTGAAAGGGTTCATAAGTGGCCAGATTAGTCTTTTGTCAGATTTGGTAAGCCTGAATTTGAGTTCTAATTTGTTGACGGGTGAAATACCTGCTGGACTAGGTCAAAAATCCCTGATACACCTGGACTTGTCAAACAATCAGTTAACGGGCTCAATACCTGATAGTATAGGAGCCTCTTCAAGTCTACAGCTCGTGCTATTGAATGGTAACTTATTGGAAGGACAAGTACCAGAACAACTTTATTCGATTGGTGTGCATGGTGGAGCTATAGATCTATCTGGAAACAAAGGTTTGTGTGGTGTACCATCTCTGCCAGCTTGTCCTTTGTTTTGGGAAAACGGAAAATTATCTACTCAGGCTAAAATTGCAATAGGCGTGTCCTGTTCTTTTGTTTTCTGTACGATACTGCTGGTGGTCTATATTTTCATCAGGAGGAGAAGGAATGACTATGACTTTGCTCTACCTCATGAGTTAACATCATTAGCAGCCAAGAGAAATCGATATCAGAGGCAGAAATCCTTGATGGTTCTTGAGATGGAGAGTCAACACGCCAAGGGACAACCTTCACATTTTACGACACAATAA 1911 0.5086 MSIFLTLTLLSSIFGTTISTNLPPSFSFPYGLSYHIDCGSPTNTTDPFNTTWLSDRYFSGGATGIVSEPLNFHHAHEKTLRFFPISSGKKNCYAIPSLPPSRYLLRTFVVYDNYDGRSHPPSFDVAIASTVVFSWRSPWPPSLARDGAYADLFATILSSEALICFYSLATDPPVISSIELFAADLASYDAAAIADNGTVLVNYGRLSCGSDQWGPGFSNDSDLFGRSWQSDSVFRTGQSKIVAVSTRNSISGAEEKPNYFPEKLYQTAVMTATTAEEGGGVLEYELRVDAKLDYLVWLHFAEIEGRVRRVGGRVFDVYINGDNLTRVDIYKQVGGFAAFTWHHTVKNLSSSVLSVKLVGVVGAPLICGIENYALVPSDPSTVPQQVVAMKALKDSLRVPERMGWNGDPCAPTNWDAWEGVTCRMSKDNTALVISQIDLGSQGLKGFISGQISLLSDLVSLNLSSNLLTGEIPAGLGQKSLIHLDLSNNQLTGSIPDSIGASSSLQLVLLNGNLLEGQVPEQLYSIGVHGGAIDLSGNKGLCGVPSLPACPLFWENGKLSTQAKIAIGVSCSFVFCTILLVVYIFIRRRRNDYDFALPHELTSLAAKRNRYQRQKSLMVLEMESQHAKGQPSHFTTQ* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1411 636 Pfam Malectin-like domain 36 373 IPR024788 -
Vra11g1411 636 ProSiteProfiles Leucine-rich repeat profile. 479 501 IPR001611 GO:0005515
Vra11g1411 636 PANTHER DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 18 636 - -
Vra11g1411 636 SUPERFAMILY L domain-like 381 524 - -
Vra11g1411 636 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 18 636 - -
Vra11g1411 636 Gene3D Ribonuclease Inhibitor 384 551 IPR032675 -
Vra11g1411 636 Gene3D - 204 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1411 Vra-Chr11 17111286 17124663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1411 38 616 Receptor kinase-like Gene Family AT2G14440 26.656 3.83e-38 149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1411 11 17111286 17124663 Vra11g1411 11 17111286 17124663 ECH