Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1356 ATGACGCTGTGGATCAAGGCCACTGGAGCGTTGAAGGATAGGTACAGCATTTGGGTGGCGAGGCTCTTACCCAGTGGTCCATGCAGGAACCCTGATCTTGAAATGGTCATCATCAAGGCAACAAGCCACGACGAACAATGCATGGATTACAAGAACGTTCAGAGGGTTTTCAAATGGCTACGCACCTCACCCTTGTACCTTCAGCCTCTTCTCTACACTCTTTCAATCAGGATGGAAAAGACTCGTTCTTGGGTTGTGGCACTCAAGGGCTTGATGCTCATTCATGGGGTCTTCTGTTTTGATCTTCCCGGGGTGCAGAAGATGGGAAGGTTGCCGTTTGATTTGTCGTTGTTCAGCGACGGACACGTAAACCCTAACAGGGCCTGGGTTTACAATGCCTTTGTTAGGGCTTATTTCTTGTATTTGGACCAAAAATCAGCGTTTGTGAGGATGGAAGCAATGAGAGAGACCAAACGTGGAGGAAAGGAGAAGGAAGAGAGCGTGATGGAAGAGCTGAAGAGCTTGGAGAAGCTGCTTGATTTGATCGATTTGCTTCTGCAAGTGAAGCCCAGGAGCCCCCGCATGAACGTGGTGCTTGTTCTTGAGGCCATGGATTGTGTCATGGACGAGGTTTTGGAAGTGTATGAGAAGTTTTCTGCTAGGGTTCATCGAGTTGTGGAGAGAATACTCGACATGGGTGGGGAAGAGGAAGCTAGGGTTGGTCTGGAAGTTGTGAGAAAAGCTGAATTGCAAGGGAACAAGATGACTACGTACTTCAACTTCTGTAAGGAGATTGGTATCCTTAATGTTTCGGACTGCCCTGAAATTGTGAGGGTGGATGAGAAAGACATTGAAGAACTGATAAGAATCAGAGACGGAAAAGAGATGGAGAGTGAGGAAAGTGATGAGGAAAATGGTGTTGAGGATAATAATTGCAGAGCCATTGTGAGGTTTGAGGAGACGAAGCAGACGGATTTGAAGACTGTGATCACAGAGCAATGGGAAGTGTTTGAGGATGATTTAGCAGTTGATGTTATGGATGGTTCAACTGTCACAGCAAATAACCCTTTTCTCGACTATTCTTTCAGCCTCGTACCCTATGTTCCTGTTTCTAACAATTGTGTTCTTCCCGATTTAATTGTTTTGTAG 1149 0.4613 MTLWIKATGALKDRYSIWVARLLPSGPCRNPDLEMVIIKATSHDEQCMDYKNVQRVFKWLRTSPLYLQPLLYTLSIRMEKTRSWVVALKGLMLIHGVFCFDLPGVQKMGRLPFDLSLFSDGHVNPNRAWVYNAFVRAYFLYLDQKSAFVRMEAMRETKRGGKEKEESVMEELKSLEKLLDLIDLLLQVKPRSPRMNVVLVLEAMDCVMDEVLEVYEKFSARVHRVVERILDMGGEEEARVGLEVVRKAELQGNKMTTYFNFCKEIGILNVSDCPEIVRVDEKDIEELIRIRDGKEMESEESDEENGVEDNNCRAIVRFEETKQTDLKTVITEQWEVFEDDLAVDVMDGSTVTANNPFLDYSFSLVPYVPVSNNCVLPDLIVL* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1356 382 CDD ANTH_N_AP180_plant 33 148 - -
Vra11g1356 382 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Vra11g1356 382 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 357 IPR045192 GO:0048268|GO:0072583
Vra11g1356 382 SUPERFAMILY ENTH/VHS domain 32 152 IPR008942 -
Vra11g1356 382 Gene3D ANTH domain 154 307 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Vra11g1356 382 Pfam ANTH domain 32 286 IPR011417 GO:0005543
Vra11g1356 382 Gene3D - 5 153 IPR008942 -
Vra11g1356 382 SUPERFAMILY GAT-like domain 164 287 - -
Vra11g1356 382 PANTHER OS08G0467300 PROTEIN 1 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1356 Vra-Chr11 16550021 16551169 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1356 11 16550021 16551169 Vra11g1356 11 16550021 16551169 ECH