Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0847 ATGGTCATATCAGATGAGAACAGATCTAAACCAGTGAACCCCACAAGTTTTCAAGGAGGGATGAATTGTGGGGGAAACAGAAAGGTGGGACAGAACAGAAGGGCGTTGAGCGTGATCAATCAGGATCTGGTGGCGGAAGGGAGACCTTACCCTTGTGTTGTTAACAAGAGAACATTGGCAGAAAAACAAGATGTGTGTGAAAAGAAGCAGGCGGATCCGGTGCATCGACCCATCACAAGGAGGTTTGCTGCACAGATTGCCAGCACACAGCAAAATCGTGCTGAGGGAACCAAAAGGTCAAACTTGGGAAATTCAAATTCGAATGGATTTGGAGAGGTTATATTTGTTGATGATGAACACAAACCAACGGATGACCAACCGGTGCCAATGTCTTTGGAGCAGACAGTGTCAGTGCATAATGAATTAGATCAGATGGAGGAAGTTGAGATGGAGGATATAATTGATGAGACAGTTTTGGACATTGATATATGTGACGCAAATAATCCCCTTGCAGTGGTGGATTATATTGAAGATCTTTACGCCTACTACAGAAAAATGGAGGGTTCTAGCTGTGTCTCACCCAATTATATGACACAGCAATTTGACATTAATGAAAGGATGAGAGCTATACTTATTGACTGGCTTATTGAGGTGCACGACAAATTTGACCTCATGCATGAGACATTGTTCCTTACAGTTAATCTCATAGACAGATTTTTGGCAAAGCAGACAGTTGTAAGAAAGAAGCTTCAGTTGGTTGGACTAGTTGCAATGCTTCTGGCATGCAAGTATGAAGAGGTTTCAGTTCCTGTGGTAGGGGATCTAATTCTCATATCAGACAAAGCATACACAAGGAAGGAAGTTCTGGAGATGGAGAAGTTGATGGTCAACACATTGCAGTTTAACATGTCTGTGCCAACAGCATATGTTTTTATGAAAAGATTCCTAAAGGCAGCTCAAGCAGACAGAAAGCTTGAGCTACTGGCTTTCTTCCTAGTAGAGCTATCTCTAGTGGAATATGAGATGCTGAAGTTCCCTCCATCCTTGCTAGCAGCAGCTGCTGTTTATACAGCTCAATGCTCCATTTATGGCGTGAAACAATGGAGTAAAACATGTGAATGGCACTCCAATTACTCAGAAGATGAGCTATTAGAGTGCTCTACATCAATGGTTGATTTTCATGAGAAGGCTGGGAAAGGGAAACTTACTGGGGTACATAGGAAGTACTGTTCATCTAAATTTAACTACACTGCAAAATGTGAACCCGCACGTTTTCTTCTGGAGGAGTCGTTGTAG 1296 0.4244 MVISDENRSKPVNPTSFQGGMNCGGNRKVGQNRRALSVINQDLVAEGRPYPCVVNKRTLAEKQDVCEKKQADPVHRPITRRFAAQIASTQQNRAEGTKRSNLGNSNSNGFGEVIFVDDEHKPTDDQPVPMSLEQTVSVHNELDQMEEVEMEDIIDETVLDIDICDANNPLAVVDYIEDLYAYYRKMEGSSCVSPNYMTQQFDINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLAKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKEVLEMEKLMVNTLQFNMSVPTAYVFMKRFLKAAQADRKLELLAFFLVELSLVEYEMLKFPPSLLAAAAVYTAQCSIYGVKQWSKTCEWHSNYSEDELLECSTSMVDFHEKAGKGKLTGVHRKYCSSKFNYTAKCEPARFLLEESL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0847 431 Gene3D - 178 418 - -
Vra11g0847 431 CDD CYCLIN 207 296 IPR013763 -
Vra11g0847 431 SUPERFAMILY Cyclin-like 167 303 IPR036915 -
Vra11g0847 431 SMART Cyclin_C_2 306 423 IPR004367 -
Vra11g0847 431 PIRSF Cyclin_A_B_D_E 10 431 IPR039361 -
Vra11g0847 431 PANTHER CYCLINS 22 426 IPR039361 -
Vra11g0847 431 SMART cyclin_7 213 297 IPR013763 -
Vra11g0847 431 SMART cyclin_7 310 392 IPR013763 -
Vra11g0847 431 MobiDBLite consensus disorder prediction 1 28 - -
Vra11g0847 431 Gene3D - 192 304 - -
Vra11g0847 431 CDD CYCLIN 304 391 IPR013763 -
Vra11g0847 431 Pfam Cyclin, N-terminal domain 178 304 IPR006671 -
Vra11g0847 431 ProSitePatterns Cyclins signature. 208 239 IPR006671 -
Vra11g0847 431 Pfam Cyclin, C-terminal domain 306 421 IPR004367 -
Vra11g0847 431 MobiDBLite consensus disorder prediction 1 22 - -
Vra11g0847 431 PANTHER CYCLIN-B2-1 22 426 - -
Vra11g0847 431 SUPERFAMILY Cyclin-like 305 423 IPR036915 -
Vra11g0847 431 MobiDBLite consensus disorder prediction 88 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0847 Vra-Chr11 7103538 7106703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0847 1 427 Core Cell Cycle Gene Families AT1G20610 57.834 6.92e-175 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0847 K21777 - gmx:100798068 775.778