Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0013 ATTGTTAACAGCTTTTACGAACTGGAGCAGGTGTACGCTGATTATTATGAAAAACTACGGGGACGGAAAGCGTGGTTCGTAGGTCCTCTTTCTCTCTGCAACCAACAGCAAGACAGAGGCAAGCGAGGGAAGGAAGCCTCGGTTGACGAAGGGGACATTTTGAAGTGGCTGGATTCGAAGAAAGCCAACACAGTGGTTTACGTTTGTTTTGGAAGCATAGCTAACTTCAGTGAAAGTCAGTTGAGAGAAATAGCGAGGGGACTTGAGGATTCGGGACAAAAATTTATATGGGTTGTGAGGAGAAGTGACAAGGAATGGCTTCCGGAGGGGTTTGAGAGAAGAACAGAAGGAAGAGGAATGATTATTTGGGGATGGGCACCTCAACTTCTGATTCTTGACCATCCAGCGGTGGGAGCCTTTGTGACACACTGTGGATGGAATTCGACGCTAGAAGCTGTGTCCGCTGGGGTGCCCATGGTCACTTGGCCCGTTTCTGCTGAACAGTTCTACAATGAGAAGTTAGTGACGGAGATTCTTGAAATTGGGGTCCCTGTTGGTGTTAAAAAATGGACTAGAATTGTGGGAGACAGTGTTGGCGGTGAGGCGCTTGAGAAGGCACTGAAAAGAATAATGGTAGAGGAAGAAGCAGAGACTATCAGAAACAGAGCACACAAACTGTCAGAGATGGCAAGAACTGCCGTGGAACGCAACGGATCATCTTCCTGTTCCCTCACTGATCTGATACAACGCCTTCAGTCGATCGCAGGCCTTCAAAATTGCCCAAAATCATCTGAATGGCTCTAG 804 0.4764 IVNSFYELEQVYADYYEKLRGRKAWFVGPLSLCNQQQDRGKRGKEASVDEGDILKWLDSKKANTVVYVCFGSIANFSESQLREIARGLEDSGQKFIWVVRRSDKEWLPEGFERRTEGRGMIIWGWAPQLLILDHPAVGAFVTHCGWNSTLEAVSAGVPMVTWPVSAEQFYNEKLVTEILEIGVPVGVKKWTRIVGDSVGGEALEKALKRIMVEEEAETIRNRAHKLSEMARTAVERNGSSSCSLTDLIQRLQSIAGLQNCPKSSEWL* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0013 267 Gene3D Glycogen Phosphorylase B; 1 242 - -
Vra11g0013 267 Gene3D Glycogen Phosphorylase B; 41 232 - -
Vra11g0013 267 PANTHER UDP-GLUCOSYL TRANSFERASE 73B2-RELATED 1 252 - -
Vra11g0013 267 ProSitePatterns UDP-glycosyltransferases signature. 125 168 IPR035595 -
Vra11g0013 267 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 35 177 IPR002213 GO:0008194
Vra11g0013 267 CDD GT1_Gtf-like 5 233 IPR002213 GO:0008194
Vra11g0013 267 PANTHER GLYCOSYLTRANSFERASE 1 252 - -
Vra11g0013 267 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 1 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0013 Vra-Chr11 163604 164540 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0013 1 252 Glycosyltransferase AT2G15480 53.333 1.31e-93 283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2477 8 42764528 42765905 Vra11g0013 11 163604 164540 PCT