Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0175 ATGATGATGATGATGTTTGATGAGATGGGGTTTTGCAATGATTTGGATACTGTCACTGCGACCCTTGGAGAAGAAAATATTACCACTGGGCAAGCTGATCCAGAGGCCATAGTTGAGGATGATTTTAGTGATGAAGAAATTGGAGTAGATGAGCTTGAGCACCGGATGTGGAAGGACAAAATGCTTCTCAAGAGATTGAAGGAGCAAAGTAAATCCAAAGAAGGAATCGATGCCGTGAAGCAGAGGCAGTCTCAAGAACAGGCAAGGAGGAAAAAGATGTCCAGGGCTCAAGATGGAATCTTGAAGTACATGCTGAAGATGATGGAGGTTTGCAAGGCACAAGGATTTGTTTATGGGATAATCCCCGAGAAGGGTAAACCAGTGACAGGAGCATCTGATAATCTTCGTGAATGGTGGAAGGATAAAGTGAGGTTTGATCGAAATGGACCTGCTGCTATAACAAAGTACCAGGCTGATAATGCTATCCCTGGAAGGAATGATGGATGCAATTCGATTGGTCCAACTCCACATACCTTGCAAGAGCTGCAGGACACAACCTTGGGTTCTCTCTTGTCAGCACTCATGCAACACTGTGATCCTCCTCAGAGGAGGTTTCCCTTGGAGAAGGGTATTCCTCCACCATGGTGGCCCACAGGAAATGAAGTATGGTGGCCACAAATTGGTTTACCTAAAGATCAGAGTCCTCCTCCTTACAAGAAGCCCCATGACCTAAAGAAGGCATGGAAAGTTGGTGTTCTGACTGCAGTTATAAAGCACATGTCCCCAGATATTGCCAAAATTCGGAAGCTTGTGAGGCAGTCTAAGTGCCTTCAGGATAAGATGACAGCCAAGGAAAGTGCAACCTGGTTGGCAATCATCAATCAGGAGGAGGCCTTGGCAAGAGAGCTTTACCCTGATTATATTCCCCCATTAGCCTCTGGTGGAGGGAGTGGATCTTTGGTGGTCAATGATGGCAATGAATATGATGTTGAAGGGGGTGAGGATGAGCCTAACTTCGATGTGGAAGAGAGGAAACAGGAGAATATTCACATGTCCAATCTGGGGATGGAGAGAATGAGGGGAACTATGAGTGTTCAGCAGCCCTCTTTTTCTATCAAGGGAGAGGCAGTTACAACAAATTTGGATCTTCTTAGGAAGAGGAAGGCCTCTAATGACTTTAACATGATGGATTTGAAGATTTACACATGTGAACAGCCTCAATGTCCTTACAGTCAAGTTCAGCTTGGTTTCCCTGATAGAATTTCTAGAGACAATCATAGGTTAATTTGTGCATTCAGAGGTCCTTCAGATTTTGGGGGTCCAAACTTTCATGTTAATGAGGTAAAGCCAGTGATATACACCCAGTCCTTTGTTCCACCCAAGTCTACTGCTCAGTCTGCTAACATGGCCCCGTCTGTAATTGATCTCACTGGACTTGAAGTTTCAGAAGATGGCAAGAAAAGAATCAGCGACCTTATGACTAACTACGATACAAACGTTCAGGGCAACAAGAACATGAGTTCATGTAATCGTGTAGCTGGCGAGGTTTTGAACTTTCCTCAGCATGGCATGCAGCAGCATCAACAGGACAACTTCATTCGCGGTCGAGGAATCACTATGGAAGGAAACGTCTTTGACGAAGCTACCATGTCAAATAATCATCATACTTTTGCAAGAGACGAATGCCAATTTGACCGGTTCAAAGCTTTGAATAGCCCCTTTGAGACCAATCACAACAACAACAGTAACTTTCATTCCATGTTTGGGTCCTTTTGTGATTTGGCATCATTTGATTTCAAGGAGGATATGCAAGGAGTAGGAATGGATGCTCTTCAGAAACAGACAGATTTTTCTGTATGGTACCAGTGA 1869 0.443 MMMMMFDEMGFCNDLDTVTATLGEENITTGQADPEAIVEDDFSDEEIGVDELEHRMWKDKMLLKRLKEQSKSKEGIDAVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNAIPGRNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGIPPPWWPTGNEVWWPQIGLPKDQSPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYIPPLASGGGSGSLVVNDGNEYDVEGGEDEPNFDVEERKQENIHMSNLGMERMRGTMSVQQPSFSIKGEAVTTNLDLLRKRKASNDFNMMDLKIYTCEQPQCPYSQVQLGFPDRISRDNHRLICAFRGPSDFGGPNFHVNEVKPVIYTQSFVPPKSTAQSANMAPSVIDLTGLEVSEDGKKRISDLMTNYDTNVQGNKNMSSCNRVAGEVLNFPQHGMQQHQQDNFIRGRGITMEGNVFDEATMSNNHHTFARDECQFDRFKALNSPFETNHNNNSNFHSMFGSFCDLASFDFKEDMQGVGMDALQKQTDFSVWYQ* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0175 622 Coils Coil 49 69 - -
Vra10g0175 622 MobiDBLite consensus disorder prediction 73 93 - -
Vra10g0175 622 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 3 621 IPR006957 GO:0005634
Vra10g0175 622 Pfam Ethylene insensitive 3 50 297 IPR006957 GO:0005634
Vra10g0175 622 Gene3D - 82 159 IPR023278 GO:0003700|GO:0005634
Vra10g0175 622 Gene3D - 174 307 IPR023278 GO:0003700|GO:0005634
Vra10g0175 622 SUPERFAMILY DNA-binding domain of EIN3-like 176 300 IPR023278 GO:0003700|GO:0005634
Vra10g0175 622 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 3 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0175 Vra-Chr10 4824212 4827570 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0175 4 621 EIL Transcription Factor Family AT3G20770 58.025 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vra10g0175 EIN3 1.5e-129 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0175 10 4824212 4827570 Vra6g0424 6 3445561 3449322 PCT