Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04865 ATGTCTCCATCAATGAAATCAAAATCCAAGTCTAAGGATAAGGCTTTGGCTAAGGCTGCTAAGGAACAACAAAAGATCTCTCCAAAGACTTCTGGATCTTCTAATGAGGAGAGCGGCATTCTCGCTACTGCAGGCGATCCCATCTCGGAAACAGTTCAAACTCTCGAATCATCTTTGGTTGATTCTTCAGCCATAGTTAATGACAACAACAACAACAACAACCAATTCTCGAAAATGAACGATGCAGATGATCATTCTAGTAGTCCTCAAGGAACGGTGTCTGAGTACGATTCAGTTTCTAATAACGGAAGCTGTTCTGGTGAATCGGAAGACACTAAAGAGAAAGCTGCAAACTCGACTACGCGGTTGGATATTATACCTGGTTGTGATAACGACAGAAGGGATAAGATCCGGCTGAAGAATGAGAGAAAGCACCAGAGGCAGAGGGAAAGGAGAGCTCATGAGTTGCACGACCGATGCGGCGCGTATCTGATGTCGAGGAAGCTAGACAACCTTGTGCAGAAGTTAGTGGCGATGGGTTTCTCTTCGGAGCGGGCAACGTTAGCTTTGAAGTTAAATGACGGGAAATTAGAAGAATCAATATCTTGGCTGTTTGAAGGAAGCGAAGCAAAAGATACTACCAACCATAGTGAAAGTAATTTGAAAATTGACATAAGTGAAGAGCTTGAACAAATTTATAATTTGGAGGTGAAATACAATTGTTCAAAGCAAGAAGTCGAGAGAGTAGTTGTTGCCTGTGAAGGCGATCTTCAAAAGGCGGAAAATTCGTTAAAATCTCAGAAGCAAGAATCTCCTATGAACCAGTCAGAAAATTCTGCTCAAAATAATATGATGAGAACTCATGGATTGCAACCAGCTTTAGCGACGATACAGCAGAGAGGGAGTGAAAGTGACTTCAACTATTACAACGTTGGTGGTGCTGATTCCATGTTCCAAGATCTTGAAAATAGGAATCCGCAGTCTTTACACATGAATCATCAAAATGATTTGACACAGAAAAGATGGGGTGGAAGTGTTTCAGCATCAAATCCTTCTAATATGTTACCTATGTCTCAATCCATACAAGCAATGTCGCCGTTTGTTAAAATGGAGGCACAGCCGAGTGCGTATAGGAACGAAGGAAGAATGATTCATCAAGGAGTAGGAAGGGAGCCGGTAGTCATGATGCAACATTCCCAGTTCGCCGATGCCAAACAAAATTATCTAAATTCTATGAATTCCATGCCTTCAGGAACATCTGGTTGGTATGTAAATGGCGCTCCAGCGTACGAAAATACAAGGTCGAACGGGAATTTGCTACTACAAAATCATGGCATGGGAACCGTCGGCGCAGATCGCTTGCAGCAACTATGTCAAGCTCCTTATAAAGAGTATTCCCATGTATTTGGACCGTTAGATTCCTCAATCTCATCAGGTGGAATGGGAGGTTTTTATAAACCAATGGTTGCATCGTCACTGTCACAGACAATGCCTTCCCACTCTCAACACCACGGTTCGTGGAACACCGCCGCATCTTCACCTGCACTTACAGTTCCGCCTTCCCTTGGATTATTCTGCGGTCATCAAAATCCATCAGCCAGATCATTCAACTCACATTCTCACGTCGATTGGAATACCGGGGGCTTGGTGCAAGAGTTCGACTACAACAACATAGATTGGAGTTTGGATTGCCCGTCGTCATCCCGATCAGGTGACGTTTGGCTAGGATTCTCATCGTTGTTGAGAAACAACACCGGGAATAGGATGGCCAGTTCTTACATGGCTGGATCTCGAAATGTCGGCTCAGCTAGGGAAACATCGTCGTCTGCTGGCTTGCGAGATTGGACCTCACCGTTTGCTGGGAAGGACATATTCAGTGCTCCAAGGAAGTTTGTTACTTTTCCTCCTATGTAG 1914 0.4404 MSPSMKSKSKSKDKALAKAAKEQQKISPKTSGSSNEESGILATAGDPISETVQTLESSLVDSSAIVNDNNNNNNQFSKMNDADDHSSSPQGTVSEYDSVSNNGSCSGESEDTKEKAANSTTRLDIIPGCDNDRRDKIRLKNERKHQRQRERRAHELHDRCGAYLMSRKLDNLVQKLVAMGFSSERATLALKLNDGKLEESISWLFEGSEAKDTTNHSESNLKIDISEELEQIYNLEVKYNCSKQEVERVVVACEGDLQKAENSLKSQKQESPMNQSENSAQNNMMRTHGLQPALATIQQRGSESDFNYYNVGGADSMFQDLENRNPQSLHMNHQNDLTQKRWGGSVSASNPSNMLPMSQSIQAMSPFVKMEAQPSAYRNEGRMIHQGVGREPVVMMQHSQFADAKQNYLNSMNSMPSGTSGWYVNGAPAYENTRSNGNLLLQNHGMGTVGADRLQQLCQAPYKEYSHVFGPLDSSISSGGMGGFYKPMVASSLSQTMPSHSQHHGSWNTAASSPALTVPPSLGLFCGHQNPSARSFNSHSHVDWNTGGLVQEFDYNNIDWSLDCPSSSRSGDVWLGFSSLLRNNTGNRMASSYMAGSRNVGSARETSSSAGLRDWTSPFAGKDIFSAPRKFVTFPPM 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04865 637 Gene3D - 130 220 - -
Vivi7g04865 637 Coils Coil 243 270 - -
Vivi7g04865 637 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 168 207 IPR015940 -
Vivi7g04865 637 MobiDBLite consensus disorder prediction 1 128 - -
Vivi7g04865 637 PANTHER UBIQUITIN-ASSOCIATED/TRANSLATION ELONGATION FACTOR EF1B PROTEIN 1 635 - -
Vivi7g04865 637 SMART uba_6 169 206 IPR015940 -
Vivi7g04865 637 MobiDBLite consensus disorder prediction 24 40 - -
Vivi7g04865 637 SUPERFAMILY UBA-like 170 210 IPR009060 GO:0005515
Vivi7g04865 637 MobiDBLite consensus disorder prediction 47 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04865 Vivi-Chr7 126817358 126820235 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04865 7 439 EF-hand Containing Proteins AT5G12120 38.155 2.90e-70 238