Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04864 ATGAAGAAGAAGCTCGATACCCGTTTTCCTGCTGCTCGGATAAAGAAGATTATGCAAGCAGATGAGGATGTTGGAAAGATAGCACTGGCTGTGCCTGTTTTAGTCTCTAAAGCTCTAGAGCTGTTTCTGCAAGATCTTTGTGACCGCACTTATGAAATAACTCTTCAAAGAGGGGCAAAAACCATGAATTCCTTGCATTTAAAGCATTGTGTACAAAGCTATAATGTCTTTGACTTTCTGAAGGATGTAGTCAGCAAGGTTCCTGACTACGGCCATGGTCACGGCCATACTGATGCTGGTGGCGCTGATGATCAGGCCATTCCAAAAAGAAGGAAAGCAGCAGGTGATGATTGTAATGACAGCGATGAAGAAGCTAAGAGGGGCAAGATGGTTGAGTTGGGACACCCTAGCCCTACTGGTAGGGGAAGAGGCCGAGGTAGAGGAAGAGGACGTGGTCGAGGTCGGGGACGTGCTAGTCAAAGAGAGGGACATCATCAGGAGACTGAGTTTGATCCCTTTCCTTCTATTCCCCAAGTTAGCCAACAGATTACAGATACAAATGTGGTTATACATGATATCTCAGAGCCAAGGGAGTTACCAAAGGAGAATATCGTTGCTCCTGTTGAAAACTCCGACTCACTCCGTAATATTGATCTGAATGCCAATATGAATGAAAGTGATGACAAAAAGGTCAACACAGTTGTTAATCTCGCAGTCACTATTCCTGAAACCACTAATCCCGATGCTGCTAATCCTGCACATGCTAATCCCGATGCCGCTAATCCTGCACCTGCTAATTCCGATGCCGCTAATCCTGTTGCCGCAATTCCTGAAGCCGGGAAAACCTCACTGTCTGAACCTGCTCCAGCAGACAGCATGCATCATGAAGAAATTCCGGGCTGGTCCCTTTCTGAGGTAGACAAGATGGCCATTGATACGATGCAGCTCGCACAGCGAATGGAAGAGGATGATGAAGATTATGACGAGGAGGACGAGTAA 999 0.4655 MKKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLKDVVSKVPDYGHGHGHTDAGGADDQAIPKRRKAAGDDCNDSDEEAKRGKMVELGHPSPTGRGRGRGRGRGRGRGRGRASQREGHHQETEFDPFPSIPQVSQQITDTNVVIHDISEPRELPKENIVAPVENSDSLRNIDLNANMNESDDKKVNTVVNLAVTIPETTNPDAANPAHANPDAANPAPANSDAANPVAAIPEAGKTSLSEPAPADSMHHEEIPGWSLSEVDKMAIDTMQLAQRMEEDDEDYDEEDE 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04864 332 FunFam dr1-associated corepressor homolog 1 86 - -
Vivi7g04864 332 SUPERFAMILY Histone-fold 3 90 IPR009072 GO:0046982
Vivi7g04864 332 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 119 - -
Vivi7g04864 332 MobiDBLite consensus disorder prediction 155 169 - -
Vivi7g04864 332 MobiDBLite consensus disorder prediction 94 131 - -
Vivi7g04864 332 Coils Coil 317 332 - -
Vivi7g04864 332 MobiDBLite consensus disorder prediction 244 305 - -
Vivi7g04864 332 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Vivi7g04864 332 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Vivi7g04864 332 MobiDBLite consensus disorder prediction 94 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04864 Vivi-Chr7 126790274 126793589 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04864 1 134 CCAAT-HAP5 Transcription Factor Family AT3G12480 77.206 9.65e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Vivi7g04864 CBFD_NFYB_HMF 2.7e-19 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04864 7 126790274 126793589 Vivi7g04864 7 126790274 126793589 ECH