Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04860 ATGCAACTTCTTAGGAAGAAACACAAAACCTTCTTTCAAGTGTTCTTCCTCTTTCCTCAACACTTTCCCCATTCAAAAAAACCAAACAAAAAAATGGCCATGGAAAAATCAAATTCCTATGAGAATTTAAAACACTACATTGCTATGATATGCTTACAATTTGGTTATGCTGGTATGAATATCATCACTAAGGTTTCACTTAACCAAGGCATGAGTCACTATGTTCTTGTGGTTTATCGCCACGCTTTCGCAACCGCTTCTATAGCTCCATTTGCACTTATGTTTGAAAGGAAAGGACAACCAAAGATAACATTCAAAATTTTCATCCAAATTTTCATCCTAGCTCTTCTTGGGCCAGTGATTGATCAAAATTTCTATTATGCTGGATTGAAACTCACATCTCCAACTTTCTCTTGTGCAATGAGCAACGTGCTTCCAGCCATGACTTTTGTCATGGCAGTTTTATGCAGGATGGAGAAGATAAACATAAAGCAAGTGAGATGTCAAGCAAAGATATTTGGAACAATAATGACAGTGGCAGGTGCAATGCTAATGACATTATACAAAGGACCAATAGTGGAGATGATATGGGCCAAACATAGACATCCTCAAAATGAAACACATGAAACAACCACCACAGGCTCTTCTGAAAGAGATTGGATTTTAGGTTGCACTTTCCTTATCATTGCCACTTTTGCTTGGGCTTGTCTCTTTGTTTTGCAAGCAAAAGTTATTGAAACGTACAAGCATCATCAACTGAGTCTTACTTCACTTATGTGTTTCATTGGTACTCTTCAAGCTATTGCTGTTACTTTTGTGGCTGAGCATAATCTTTCTGTTTGGAGGATTGGTTGGGATATGAGTTTGCTTGCTGCTGCCTATGCTGGAATTGTGACCTCAAGCTTAGCATACTTTGTACAAGGGCTGGTGATTAGGAAGAAAGGACCTGTATTTGCAACTGCCTTTAGCCCACTTATGATGATCATTGTTGCAGTCATGGGTTCCTTTATCCTTGCAGAACAGATATATTTTGGAGGTGTGATAGGGGCCATCTTGATTGTTATAGGTCTATACTCTGTTCTATGGGGAAAGCATAAGGAAGAAACAGAAAGAAAAATAGAAAATGATATTCCTTTGCCTATAAAAGGTGTTCAAATGGGTGCAAATTCTGGGCCAGTGATTGATGACACTGAACAAGTGAAAAATGGTCAAGTTGGAGATACTAACAACATGCTTTCATCACTTGCAATAACCATGCCTACTAAAGTACCTACTACTACTAATAATGTTAACCAACAATAA 1302 0.3802 MQLLRKKHKTFFQVFFLFPQHFPHSKKPNKKMAMEKSNSYENLKHYIAMICLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATASIAPFALMFERKGQPKITFKIFIQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNVLPAMTFVMAVLCRMEKINIKQVRCQAKIFGTIMTVAGAMLMTLYKGPIVEMIWAKHRHPQNETHETTTTGSSERDWILGCTFLIIATFAWACLFVLQAKVIETYKHHQLSLTSLMCFIGTLQAIAVTFVAEHNLSVWRIGWDMSLLAAAYAGIVTSSLAYFVQGLVIRKKGPVFATAFSPLMMIIVAVMGSFILAEQIYFGGVIGAILIVIGLYSVLWGKHKEETERKIENDIPLPIKGVQMGANSGPVIDDTEQVKNGQVGDTNNMLSSLAITMPTKVPTTTNNVNQQ 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04860 433 Pfam EamA-like transporter family 46 186 IPR000620 GO:0016020
Vivi7g04860 433 Pfam EamA-like transporter family 222 361 IPR000620 GO:0016020
Vivi7g04860 433 SUPERFAMILY Multidrug resistance efflux transporter EmrE 270 366 - -
Vivi7g04860 433 SUPERFAMILY Multidrug resistance efflux transporter EmrE 79 189 - -
Vivi7g04860 433 PANTHER WAT1-RELATED PROTEIN 46 371 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04860 Vivi-Chr7 126742857 126745939 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04860 32 420 Nodulin-like Gene Family AT5G07050 64.339 2.56e-179 504