Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04727 ATGGATTCCTCGGTCAACTTGCTTCCCGCAAAACGCCCTTCTCCAAATGGAGTTTCATCAGAGGAAGGATGCAAAAAACGTAAATTATCAAGCGGTGTTAATGTTGTAGATTACAAAAATCCTTTTGTAATCTCAGATGTTCTAAATCGTTTAGAGAGTGGAGATTTTGGAAGTGTTACAAAGGATATTGAAGCCCTTGTAATCCGAAAAATGAAAATGTTTGGCCCCTGCCTTGCAAAACATCCCAAACTTATCAACCAATTTCCGAAAGTGGTAACGAATCATGATGAGGAAACTCCCATCTCAAATAAAAAAATTAATGGTATGTCACATCAACATGTCATAGATTTGGATTTGGATGGAGGAGGGAACATGGAAAAGGATGTTTTGACACCAAAAAGAGAAAAGGATGTTTCTGGTGCGTCATTTCCCATTGTAATAAGTGATTCAGACGAGGAAGATGATAGGGAACAAAAGTCTCATCTTCCATTTCATGAAATTGCATTGCCTAGACCAGTCCAGTCTCCTGCACTAAAAATGACTGGCTATCATCATGCTCCCATTGCTTACCATGATGCTCCCTTTGCTAACCATGATGCTCCCATTCCTTACCATGGAGAGAGTGCAGATCTAAAATTTGAAACAAGTCTGCCTCCTAAAAATCCTCGTAAAGATCCTCCTAAAGATAACGCAAGGAAAGATAAAGGTGTTTATGTTGGTGTACATGAGGAGGACAATCATGAAGTTGATGCTGTAGATGATGGGCTAGACGATATTTGGAGGGAAATGTCAATGGCAATAGAAACTTCTAAAGATGTTTCTGCAGATCCTCAACCCGAAGAAGAGGAAGAAGATGCTGACTGCGATCATTCTTTTGTTTTAAAAGATGACCTTGGTTATGTTTGTCGCGTTTGTGGGGTTATTGACAGAGGAATTGAAACCATATTTGAATTCCAATACAAGGTTAAAAGGAGCACAAGAACCTATGTCTCTGAATCAGGCAATGCCAAAGAAAAAATGGATGATTTTGGTGTTAAGGTTATTAAAGACGATCTTATGGTTACTGATGTATCAGCACATCCTCGGCATGCGAATCAAATGAAACCACACCAAGTCGAAGGATTCAACTTTTTAGTCAGAAACTTGGCAGGGGACAATCCCGGGGGATGCATCCTGGCTCATGCACCAGGATCTGGAAAGACTTTCATGATTATCAGTTTCATGCAAAGTTTTCTAGGGAAGTATCCTAATGCCCGACCTCTAGTTGTGCTTCCCAAGGGAATATTGTCGACTTGGAAAAAAGAGTTTCAAACATGGCAAGTGGAAGATGTACCACTTTATGACCTATACACTGCTAAGGCAGACAGTAGATCTCAGCAACTGGAGGTGTTAAAACAATGGATGAATAACAAGAGTATCCTTTTCTTAGGATACAAACAGTTCTCTTCCATTGTGTGTGATGATAGTAATACCAATGCATCGAAGAATTGCCAAGAGATATTACTGAATGTTCCCTCAATTCTCATTTTAGACGAGGGTCACACTCCAAGAAATGAGAATACTGATATGGTACAGTCCCTATGCAAAGTACATACACCAAGGAAAGTTGTGCTGTCTGGAACCCTTTATCAAAATCATGTCAGGGAGGTATTCAACGTTCTCAATCTAGTGAGGCCAAAGTTTTTAAAGATGGACACATCTAAGCCTATTGTTCGACGCATTAAGAGTAAGATCTATCATGTGCCTGGCGTGAACAGCTTCTATGATTTAATTGAGAACACATTGCAGAAAGACCCGGATTTTAAAAGGAAAGTGGGTTTAATTCATGATTTGCGTGAGATGACCCATCAAGTTCTTCATTACTATAAAGGAGATTTTCTTGATGAGCTTCCTGGCCTGGTAGATTTCACTGTGTTTCTCAAACTTACTCCTATACAGAAGCACGAAGTTGCGAAAGTAAAGAGGATATCTAGAAAGTTCAAAATGTCTTCTGTGGGCAGTGCAGTGTATCTGCACCCAAAGTTGATGCCCATTGCAGAAAAAATAGGTGAAAAGATTGCAAAATCTGGTGAAAAGATTGCAAAATCTGTTGAAAAGAAGGCAATACCTGATCATGTAATAGACAGTTTTATAGAGGACCTAGATATAAGAGATGGTGTCAAATCAAAATTCTTTCGCAATATGCTGAACCTATGCGAATCAACTGGAGAGAAGCTTCTGGTGTTCAGTCAATATCTTTTGCCTTTGAAATATTTGGAAAGGTTAGCTATAAAATGGAATAAATGGAGTGTTGGAAAAGAAATCTTTGTGATATCAGGAGATACACAACCTGAAGAAAGGGAGTGTTCCATGGAAATGTTCAACAATTCATCGGATGCAAAAGTATTTTTTGGGTCAATCAAAGCATGCGGCGAGGGTATATCGTTGGTTGGGGCATCCCGGGTCATCATATTGGATGTTCATCTAAATCCGTCTGTTACTCGTCAAGCTATTGGCCGTGCTTTCCGGCCAGGCCAGAAAAAGAAAGTCTTTGTGTATCGGTTGGTAGCTGCTGATTCTCCTGAAGAGGAAGACCACACTACTTGTTTCAAGAAGGAATTAATTTCAAAAATGTGGTTTGAATGGAATGAATATTGTGGTGACAGGGCTTTTGAAGTTGAGACACTCGATGCGAAGGAATGTGGTGATTTTTTTCTGGAAAGTCCGTTGTTAAGGGAAGACGTAAAAGCCCTGCATAAAAGGTAA 2745 0.3971 MDSSVNLLPAKRPSPNGVSSEEGCKKRKLSSGVNVVDYKNPFVISDVLNRLESGDFGSVTKDIEALVIRKMKMFGPCLAKHPKLINQFPKVVTNHDEETPISNKKINGMSHQHVIDLDLDGGGNMEKDVLTPKREKDVSGASFPIVISDSDEEDDREQKSHLPFHEIALPRPVQSPALKMTGYHHAPIAYHDAPFANHDAPIPYHGESADLKFETSLPPKNPRKDPPKDNARKDKGVYVGVHEEDNHEVDAVDDGLDDIWREMSMAIETSKDVSADPQPEEEEEDADCDHSFVLKDDLGYVCRVCGVIDRGIETIFEFQYKVKRSTRTYVSESGNAKEKMDDFGVKVIKDDLMVTDVSAHPRHANQMKPHQVEGFNFLVRNLAGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEFQTWQVEDVPLYDLYTAKADSRSQQLEVLKQWMNNKSILFLGYKQFSSIVCDDSNTNASKNCQEILLNVPSILILDEGHTPRNENTDMVQSLCKVHTPRKVVLSGTLYQNHVREVFNVLNLVRPKFLKMDTSKPIVRRIKSKIYHVPGVNSFYDLIENTLQKDPDFKRKVGLIHDLREMTHQVLHYYKGDFLDELPGLVDFTVFLKLTPIQKHEVAKVKRISRKFKMSSVGSAVYLHPKLMPIAEKIGEKIAKSGEKIAKSVEKKAIPDHVIDSFIEDLDIRDGVKSKFFRNMLNLCESTGEKLLVFSQYLLPLKYLERLAIKWNKWSVGKEIFVISGDTQPEERECSMEMFNNSSDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQKKKVFVYRLVAADSPEEEDHTTCFKKELISKMWFEWNEYCGDRAFEVETLDAKECGDFFLESPLLREDVKALHKR 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04727 914 CDD SF2_C_SNF 721 849 - -
Vivi7g04727 914 Gene3D - 631 902 IPR027417 -
Vivi7g04727 914 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 350 562 IPR027417 -
Vivi7g04727 914 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 243 912 IPR044567 GO:0080188
Vivi7g04727 914 MobiDBLite consensus disorder prediction 217 233 - -
Vivi7g04727 914 SMART ultradead3 363 573 IPR014001 -
Vivi7g04727 914 Pfam SNF2-related domain 387 648 IPR000330 GO:0005524|GO:0140658
Vivi7g04727 914 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 381 560 IPR014001 -
Vivi7g04727 914 SMART helicmild6 753 838 IPR001650 -
Vivi7g04727 914 MobiDBLite consensus disorder prediction 212 233 - -
Vivi7g04727 914 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 724 890 IPR001650 -
Vivi7g04727 914 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 506 876 IPR027417 -
Vivi7g04727 914 Pfam Helicase conserved C-terminal domain 729 837 IPR001650 -
Vivi7g04727 914 Gene3D - 335 581 IPR038718 -
Vivi7g04727 914 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04727 Vivi-Chr7 120668429 120674841 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Vivi7g04727 SNF2_N 1.1e-20 CL0023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04727 7 120668429 120674841 Vivi7g04727 7 120668429 120674841 ECH