Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04718 ATGCTCATAATCCATTGTCTATTACATAGAAAAAGAGAGAAAGGGTCTCACCTCAATGCAATTCTGATTCTGAAAGCCAAAGTACCCAATAGTTGGAAAACCAGTGAAAGAATGCCAGGGAAACCTGAAACTGATGAATGTGGAGTAAAGCATAGTGAGCATGTTTCCATTTATTCTCATCACCCTTGGTGGCTTGAAAATGCCTCCAAATCATCTTCACTTGATCAGCTCAATTGTTCAATCATGAATTTAGAAGCCTTGGTTTCTCCTTCAGGTGGGGACGTTGCCAAGGAACACCGAAACATCAAACATTACCAATCCTCAACTCCATTTACCATGGACAAACACCTTGATCCAAATTCGCAGACGGAACTCGTTGGTCATTCAACTGTTTTAACATCGCCGTATTCACATCCACAATTCGGTCAATTCTTGACTACTTACGGACAACCAGCTATGATGAACCCTCAGCTATACCACATGCATCATACTAGAGTGCTTTTGCCACTTGAAATGGAAGAGGAACCTGTCTATGTCAATGCAAAGCAGTATCATGGTATTTTGAGGCGAAGACAGTCGCGCGCCAAGGCCGAGCTTGAAAAGAAAGTTATTAAAGTTAGAAAGCCGTATCTTCACGAATCCCGTCACCTACACGCTTTGAGAAGGGCGAGAGGGAACGGCGGTCGCTTTCTCAATACAAAGAAGCTCGAACACGATTCTAATGCCGCGATAGAAAAAGGAAACGATACCGGTGCAATGTTGGTTACCAACAAAGAGAATCAAGGCTCGTCGAATGCGTTACCGTCCGTGCAAAAATTACAGGGCTTCGATATTGGTTACCATGATGGAAATGGCTTTACAGGAGTATGTCATTCACAGGCAAATGGTAAACAGGAGGGTGATTTCTTTGGTAAAGAGAGGGACTCAAGTGGTGCTATTAAATGA 945 0.4307 MLIIHCLLHRKREKGSHLNAILILKAKVPNSWKTSERMPGKPETDECGVKHSEHVSIYSHHPWWLENASKSSSLDQLNCSIMNLEALVSPSGGDVAKEHRNIKHYQSSTPFTMDKHLDPNSQTELVGHSTVLTSPYSHPQFGQFLTTYGQPAMMNPQLYHMHHTRVLLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKVRKPYLHESRHLHALRRARGNGGRFLNTKKLEHDSNAAIEKGNDTGAMLVTNKENQGSSNALPSVQKLQGFDIGYHDGNGFTGVCHSQANGKQEGDFFGKERDSSGAIK 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04718 314 ProSiteProfiles NF-YA/HAP2 family profile. 173 233 IPR001289 GO:0003700|GO:0006355
Vivi7g04718 314 ProSitePatterns NF-YA/HAP2 subunit signature. 178 198 IPR018362 GO:0003677|GO:0016602
Vivi7g04718 314 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 68 269 IPR001289 GO:0003700|GO:0006355
Vivi7g04718 314 Gene3D - 173 234 - -
Vivi7g04718 314 PRINTS CCAAT-binding transcription factor subunit B signature 207 230 IPR001289 GO:0003700|GO:0006355
Vivi7g04718 314 PRINTS CCAAT-binding transcription factor subunit B signature 176 198 IPR001289 GO:0003700|GO:0006355
Vivi7g04718 314 SMART cbf3 172 233 IPR001289 GO:0003700|GO:0006355
Vivi7g04718 314 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 175 230 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04718 Vivi-Chr7 120549166 120551695 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Vivi7g04718 CBFB_NFYA 9.4e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04718 7 120549166 120551695 Vivi7g04718 7 120549166 120551695 ECH