Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04704 ATGAATGAGAATGGAAGTGCTAATGAACTCAACAAGAAGTGGAATTTTCCTTTCTTAGTTTTCTTCCATGATGCAAGACTTATTTTCAAGTTGGATGCACTTTCAAGGGAGATATTGGGGATTGCATTACCCTCTGCATTGGCTGTTGCTGCTGATCCTATTGCTTCACTCATTGACACTGCATACATAGGCCATTTAGGAGCCGTGGAACTTGCTGCTGCAGGAGTTTCAATTGCTTTGTTCAATCAAGCTTCAAAGATTACCATATTTCCTCTTGTTAGCATTACAACATCCTTTGTAGCCGAGGAAGACACTATCAAAAGAATGAATATTAAAGCAGCTCAAAATGATCACAACACAAACCTAACTGAACCAGCAAAGCCTCATGATCATGTTCTTCACGACATAGAGAAAGGAACATCCAACAAAGAGAATAATAATGTTAACACTCCAAAAGAGTCACAGAATGAAACAAATGGTACTGTGGTTAAAAGTTGTGCTCATGAAGATGAGAAAAAATATGATGTTAAGATGAACAATGAGATAGTTGTGAAGAAGAAGAAGAACAAGAGACACATTGCTTCGGCCTCAACAGCACTTCTTTTTGGTTCGATTCTTGGCCTCATTCAAGCTTCAATCCTTATATTTGCAGCTAAGCCTCTATTAAGCCTCATGGGCGTCAAACATGGTTCTCCAATGCTAAAACCAGCAGTGAAGTATTTAACATATAGATCAATTGGTGCTCCTGCTGTTCTTCTCTCTTTGGCAATGCAAGGAGTTTTTCGAGGATTTAAGGACACAACAACTCCTTTATATGTCATAGTTGCTGGATATTCGTTGAATGTGTTATTGGCGCCATTACTTATTTTTAAACTGAAAATGGGATTAAAAGGAGCAGCCATTTCACATGTTATCTCTCAGTACATGATGGCATTCACTCTCTTCTTCATATTAATGAAAAAGGTGTATCTCCTACCTCCAAGATTAAAAGATCTTCAGATTTTCAGGTTTCTTAGAAATGGAGGTTTGTTGATGACAAAGGTGATAGCAGTGACATTCTGTGTGACATTAGCAGCATCCTTGGCTGCAAGGTTAGGCTCAATTCCCATGGCTGCCTTTCAACCTTGCCTACAAGTTTGGTTGGCATCCTCCCTTTTTGCAGATGGTTTGGCTATAGCCGTACAGGCAATCCTAGCTGGTTCCTTTGCTGAAAAAGACTATATCAAGACAACAGCAGCCGCAACAAGGACTCTACAATTCGGTTTTCTGTTAGGAGTAGGACTCTCTCTTATTGTTGGTGTTGGCCTATACTTTGGAGCTGGAATCTTTTCCAAAAACCTTCAAGTTATACACTTTATCCGAATAGGCGCACCGATTGTAGCTGCTACTCAACCTATCAATACATTAGCATTTGTCTTTGATGGTGTAAACTATGGAGCTTCTGATTTTGCATATGCTTCATATTCCTTGGTTACAGTGTCATTGGTGAGTGTTGGTGTAGAGTTTCTTCTGTATAGAAGCAAGCATTTCATTGGGATATGGATTGCGTTAGCCATCTATATGACTCTTCGCATGTTGGCCGGTGTATGGAGAATGGGAACCGGAACGGGACCTTGGAGCTATCTCAGAGGTCGATAA 1638 0.4005 MNENGSANELNKKWNFPFLVFFHDARLIFKLDALSREILGIALPSALAVAADPIASLIDTAYIGHLGAVELAAAGVSIALFNQASKITIFPLVSITTSFVAEEDTIKRMNIKAAQNDHNTNLTEPAKPHDHVLHDIEKGTSNKENNNVNTPKESQNETNGTVVKSCAHEDEKKYDVKMNNEIVVKKKKNKRHIASASTALLFGSILGLIQASILIFAAKPLLSLMGVKHGSPMLKPAVKYLTYRSIGAPAVLLSLAMQGVFRGFKDTTTPLYVIVAGYSLNVLLAPLLIFKLKMGLKGAAISHVISQYMMAFTLFFILMKKVYLLPPRLKDLQIFRFLRNGGLLMTKVIAVTFCVTLAASLAARLGSIPMAAFQPCLQVWLASSLFADGLAIAVQAILAGSFAEKDYIKTTAAATRTLQFGFLLGVGLSLIVGVGLYFGAGIFSKNLQVIHFIRIGAPIVAATQPINTLAFVFDGVNYGASDFAYASYSLVTVSLVSVGVEFLLYRSKHFIGIWIALAIYMTLRMLAGVWRMGTGTGPWSYLRGR 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04704 545 Pfam MatE 193 287 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vivi7g04704 545 Pfam MatE 347 500 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vivi7g04704 545 MobiDBLite consensus disorder prediction 142 162 - -
Vivi7g04704 545 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 6 543 IPR044644 -
Vivi7g04704 545 MobiDBLite consensus disorder prediction 138 162 - -
Vivi7g04704 545 CDD MATE_DinF_like 36 534 IPR044644 -
Vivi7g04704 545 NCBIfam MATE family efflux transporter 44 514 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04704 Vivi-Chr7 120171222 120176657 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04704 7 120171222 120176657 Vivi7g04704 7 120171222 120176657 ECH