Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03738 ATGCAAGACCCAACAACATTTCAACCCATGAAACCAAATTTCCCCGAACAAGAACAACTCAAATGTCCACGTTGTGAATCAAGCAACACAAAATTCTGTTACTACAACAACTACAATCTCTCACAGCCTCGCCATTTTTGCAAGAACTGTAAAAGGTATTGGACCAAAGGTGGTTCTTTGAGGAACATTCCTGTTGGTGGTGGAACACGAAAAGTCACAAAACGTTCTTCAAATCCCAAACGTTCGACAACTCCATCTTCATCTTCTCCATCACCATCATCAATCACTTCTTCAGCTCAAGCTTCTTCAGCTCAAGCTTCTTCAGCTCAAACTTCTTCAGTTCAAGCTTCTTCAGTTCCAGACTCCGACCCGACCCAGATTCGTATTGACCCGGTTGAGCCAAGTTTTGGTGGAGGGAGCTTTAGTTCGCTTCTTGCATCAACTGAGCGGTTCGGGAACCTTTTTGAGGGTCTGAATTCAAATGGGTCGGGTTTAAAAATGGTGGAAATGGGTGAATTTGGGGAGAATTTGAATCATGACCCGGTTGTGAATTCGGGTTCGGGTCATAATCATAGTCTTAACCCGAATGTTAGAAATGGTGAAGCAGAGATCTTTCTTGGTTTGCAAAATGGTGATACAAGTTGTTGGAATGGGAACCATGGTTGGTCTGATCTTGCAATATACACACCTAGTTCAACTTATCAGTAG 708 0.4294 MQDPTTFQPMKPNFPEQEQLKCPRCESSNTKFCYYNNYNLSQPRHFCKNCKRYWTKGGSLRNIPVGGGTRKVTKRSSNPKRSTTPSSSSPSPSSITSSAQASSAQASSAQTSSVQASSVPDSDPTQIRIDPVEPSFGGGSFSSLLASTERFGNLFEGLNSNGSGLKMVEMGEFGENLNHDPVVNSGSGHNHSLNPNVRNGEAEIFLGLQNGDTSCWNGNHGWSDLAIYTPSSTYQ 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03738 235 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Vivi7g03738 235 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Vivi7g03738 235 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
Vivi7g03738 235 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 157 IPR045174 GO:0003700|GO:0006355
Vivi7g03738 235 MobiDBLite consensus disorder prediction 61 134 - -
Vivi7g03738 235 MobiDBLite consensus disorder prediction 78 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03738 Vivi-Chr7 103306957 103308416 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03738 5 155 C2C2-Dof Transcription Factor Family AT1G51700 50.980 1.46e-44 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi7g03738 zf-Dof 8.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03738 - - vvo:131618111 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03738 7 103306957 103308416 Vivi7g03738 7 103306957 103308416 ECH