Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00773 ATGAACACAAAAAGTGTCGACCAACTGAAACTTTCAGCTGAAACAAATAACATAGATCTCCTCTATGAAGTAATTCAAGATGACCCATCTATTTTGGAAATCATAGATAAAAAGCAATTTGTAGATACTCCTTTGCATATCGCTGCATCTAGGGGTCATCTCAAGTTTGCCACAGAAATTATGAATTTGAAACCTTCATTTGCTATGAAGCTAAATATGCAAGGATACAGCCCCATTCATCTTGCTATGAATAACCTCCCCATTCATCCTGCTGAGGATAACCCCCAAAGGGTGATGGTGTTAAAGTTGGTTGGCATCAATAAAGATCTTGTTAGAGTTAAAGGAAGAGAAGGCTTGACTCCACTTCATATTGCATGTCAAAATGGGGAGGTTGAACTTTTAGCTGAATTCCTCATTGCTTGTCCAGATTCCATTGAAGATGAAAATGTGACTGGTGAGTCTGCTTTGCATATTGCTGTAATCAATCATCAATTTAAGGCCCTTCAAGTACTTGTTGGCTGGCTCAAAGAAAATTGCAAGACAGGTGCTAGAATGCTGCAAAATAAAATATTCAACCACAAAGACGATGAAGGCAACACTGCTCTGCACATTGCAGCCCTTAGTAGTAAATCAGAGGTGGTACAATTTCTGGTAAAAAAAACCGGAATAAAATTGAATGCAAAGAATTTGAAGAGCAAAACAGCATTAGATTTAGCAACTCTAGAGAACAAGAAAATATTAATTTGTGCTAATGCAAAACCTGGCTCACAAATCACTAAGGCTATGACACTTACAGAATATCTAAGATTTTTAGCCACAATTATTGATATTCGAACTTGGATACGTAGACTTAGAACTGATATAACCGAGGAGCAGCGTAACACTTGGTTGATAGTTGCGACTCTTGTTGCAACTGTAACCTTTGAATCCGCACTGAATCCTCCTGGTGGAGTTTTCCAGGTTAGTGCAAGTGATGACAACAACATGAAAATCAAGTCTAGAGATGGGTTTTTTTCTACCCGAGGAAATGCTGGGAAATCGATCTTGTCAAAAGAGAATTTCATGGTGTTTTCAATAATGAATATGCTTTCCTTTTTCGGATCAATTACAGCAATATTATTTCTGACACCATGGGGAGCAGTAGGCCTCTTAGTGATACTTCCAGTGGGTTTGTTTATTGGTTGCTATCTATATGCTCTACCGTCAATATCTCCTACACATGCCACCACCATAATTATTTACATCCCGATCTACTCAATATTAATTATGTTTTATGTTTATTTAATTTTTATCACATACACTCATATTGTATTGAAAAAGAGATACATGAGATCGACAACTCAAACCGATGTATCCCAAACCGCTGTAGCCCGAGTTTAA 1380 0.3746 MNTKSVDQLKLSAETNNIDLLYEVIQDDPSILEIIDKKQFVDTPLHIAASRGHLKFATEIMNLKPSFAMKLNMQGYSPIHLAMNNLPIHPAEDNPQRVMVLKLVGINKDLVRVKGREGLTPLHIACQNGEVELLAEFLIACPDSIEDENVTGESALHIAVINHQFKALQVLVGWLKENCKTGARMLQNKIFNHKDDEGNTALHIAALSSKSEVVQFLVKKTGIKLNAKNLKSKTALDLATLENKKILICANAKPGSQITKAMTLTEYLRFLATIIDIRTWIRRLRTDITEEQRNTWLIVATLVATVTFESALNPPGGVFQVSASDDNNMKIKSRDGFFSTRGNAGKSILSKENFMVFSIMNMLSFFGSITAILFLTPWGAVGLLVILPVGLFIGCYLYALPSISPTHATTIIIYIPIYSILIMFYVYLIFITYTHIVLKKRYMRSTTQTDVSQTAVARV 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00773 459 ProSiteProfiles Ankyrin repeat profile. 197 220 IPR002110 GO:0005515
Vivi7g00773 459 Gene3D - 202 249 IPR036770 -
Vivi7g00773 459 SMART ANK_2a 117 147 IPR002110 GO:0005515
Vivi7g00773 459 SMART ANK_2a 74 112 IPR002110 GO:0005515
Vivi7g00773 459 SMART ANK_2a 197 227 IPR002110 GO:0005515
Vivi7g00773 459 SMART ANK_2a 151 183 IPR002110 GO:0005515
Vivi7g00773 459 SMART ANK_2a 40 69 IPR002110 GO:0005515
Vivi7g00773 459 Gene3D - 1 85 IPR036770 -
Vivi7g00773 459 ProSiteProfiles Ankyrin repeat profile. 117 139 IPR002110 GO:0005515
Vivi7g00773 459 Pfam Domain of unknown function 289 378 IPR026961 -
Vivi7g00773 459 Gene3D - 92 201 IPR036770 -
Vivi7g00773 459 SUPERFAMILY Ankyrin repeat 11 244 IPR036770 -
Vivi7g00773 459 PANTHER HOMEOBOX PROTEIN WARIAI 17 434 - -
Vivi7g00773 459 Pfam Ankyrin repeats (3 copies) 101 172 IPR002110 GO:0005515
Vivi7g00773 459 ProSiteProfiles Ankyrin repeat region circular profile. 117 139 - -
Vivi7g00773 459 ProSiteProfiles Ankyrin repeat region circular profile. 197 220 - -
Vivi7g00773 459 Pfam Ankyrin repeat 198 229 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00773 Vivi-Chr7 44635364 44636935 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00773 8 331 Miscellaneous Gene Families AT4G10720 40.597 4.06e-82 258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g00773 7 44635364 44636935 Vivi7g00773 7 44635364 44636935 ECH
Vivi2g06175 2 195874082 195878653 Vivi7g00773 7 44635364 44636935 PCT