Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00489 ATGGCTAAACTAGTTCCCAGTTTAGTTCATCCATTGAAGTCAAGGTTTTTCGGTAACCATTACACTCTTTTAACCAAACACTCTTTTCAATTTTATGGGGTTCAAGTTCAACCAAACCTTTCTTACTCTTCATCTTCATCTAAGATAAGCATGAGCCTCAAGGCTGGTATTGTTGGCCTCCCCAATGTTGGCAAGTCTACCCTCTTCAATGCCGTCGTGGAAAATGGAAAAGCCCAAGCTGCTAATTTCCCTTTTTGTACAATTGAGCCAAACGTAGGGATTGTTGCTGTTCCAGATTCTCGTCTCCATGTGCTCTCCGACCTCAGTAAATCTCAACGAGTTGTTCCAGCATCTATAGAGTTTGTAGACATTGCTGGGCTAGTCAAGGGTGCAAGTCAAGGCGAGGGGCTTGGTAATAAGTTTTTATCACATATTCGTGAAGTGGACTCCATACTTCAGGTTGTTAGATGTTTTGATGACAATGACATTATTCATGTGAATGGGAAAGTTGATCCCAAATCTGATATTGATGTTATCAACTTGGAGCTTGTTTTCACAGACTTAGACCAGATTGAAAAAAGACTAGATAAACTAAAAAAAAGCAAGGCAAAGGATTCACAAACTAAAGTCAAGGAAGAGGCAGAAAAGGCTGCATTGGAAAAAATTAGTGTAGCACTCTTGGATGGAAAACCTGCACGATCTGTGGCCTTAACAGACTTTGAAAAGGATGCTATAAAGAACCTCTGCTTACTCACCATGAAACCCGTTATATATGTGGCAAATGTTGCGGAGACTGATTTAGCTGATGCTACAAACAATGATTACGTTGTAGGTGTCAAGAATGTTGCATCTGAGCTGAAGTCAGGAATTGTAACAATTTCAGCACAGGTTGAGGCAGAGCTTTCTGAACTAGCAATTGAGGAAAGGCAAGAATATTTGAAATCCCTTGGTGTTAGTGAAAGTGGTCTTGGGAACCTAATTAGAGCAACCTATGATCTTTTGGGGTTGCGAACTTATTTTACTTCTGGTGAGAAGGAGACAAAAGCATGGACAATACTTGAAGGAATGACTGCACCTCAAGCTGCTGGAGTTATTCATTCTGACTTTGAGAAGGGTTTCATTCGAGCAGAGACAGTGGCTTATAAAGACTTTGTTGCTGCTGGTTCACTTGCTGCAGCACGAGAAAAAGGACTTTTGAGATCTGAAGGCAAAGACTACATTGTACAAGAAGGAGATGTAATGTTGTTTCGATTCAATGTATAG 1263 0.4054 MAKLVPSLVHPLKSRFFGNHYTLLTKHSFQFYGVQVQPNLSYSSSSSKISMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVAVPDSRLHVLSDLSKSQRVVPASIEFVDIAGLVKGASQGEGLGNKFLSHIREVDSILQVVRCFDDNDIIHVNGKVDPKSDIDVINLELVFTDLDQIEKRLDKLKKSKAKDSQTKVKEEAEKAALEKISVALLDGKPARSVALTDFEKDAIKNLCLLTMKPVIYVANVAETDLADATNNDYVVGVKNVASELKSGIVTISAQVEAELSELAIEERQEYLKSLGVSESGLGNLIRATYDLLGLRTYFTSGEKETKAWTILEGMTAPQAAGVIHSDFEKGFIRAETVAYKDFVAAGSLAAAREKGLLRSEGKDYIVQEGDVMLFRFNV 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00489 420 Coils Coil 181 208 - -
Vivi7g00489 420 Gene3D - 99 419 IPR012675 -
Vivi7g00489 420 FunFam Ribosome-binding ATPase YchF 164 254 - -
Vivi7g00489 420 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 53 335 IPR031167 GO:0005525
Vivi7g00489 420 FunFam Ribosome-binding ATPase YchF 323 419 - -
Vivi7g00489 420 Pfam 50S ribosome-binding GTPase 55 167 IPR006073 GO:0005525
Vivi7g00489 420 PANTHER OBG GTPASE FAMILY 45 419 - -
Vivi7g00489 420 Gene3D - 164 254 IPR023192 -
Vivi7g00489 420 CDD TGS_YchF_OLA1 334 418 IPR013029 -
Vivi7g00489 420 NCBIfam redox-regulated ATPase YchF 51 420 IPR004396 GO:0005524|GO:0005525|GO:0016887
Vivi7g00489 420 PRINTS GTP1/OBG GTP-binding protein family signature 77 95 IPR006073 GO:0005525
Vivi7g00489 420 PRINTS GTP1/OBG GTP-binding protein family signature 55 75 IPR006073 GO:0005525
Vivi7g00489 420 PRINTS GTP1/OBG GTP-binding protein family signature 138 156 IPR006073 GO:0005525
Vivi7g00489 420 PRINTS GTP1/OBG GTP-binding protein family signature 121 136 IPR006073 GO:0005525
Vivi7g00489 420 Pfam Protein of unknown function (DUF933) 336 419 IPR013029 -
Vivi7g00489 420 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 358 IPR027417 -
Vivi7g00489 420 Gene3D - 53 335 IPR027417 -
Vivi7g00489 420 SUPERFAMILY TGS-like 336 417 IPR012676 -
Vivi7g00489 420 Hamap Ribosome-binding ATPase YchF [ychF]. 52 420 IPR004396 GO:0005524|GO:0005525|GO:0016887
Vivi7g00489 420 CDD YchF 55 334 IPR041706 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g00489 7 28615535 28624549 Vivi7g00489 7 28615535 28624549 ECH