Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00267 ATGGCAATTTGTTCGTCACCTTCATCTTCTTCCTCGTTTGCATCTTCCAATAACTCGAAGTCATGGATCATCCCTGGCATCATGGTTGGAGTTTCAATTGTAGCTGCTGCCGGTGCTCACGCTTACCTAAGTCGATTCTACAAATTCCGTAGCCGGGTCGTAGGTATCATACCCGCTCGATTTGCTTCCTCCCGCTTCTCTGGAAAGCCTCTCGTTCAAATTCTTGGCAAGCCTATGATCCAGAGAACATGGGAAAGGGCAAAGCTGGCAGCTTCGTTGGATCATGTTGTTGTGGCAACTGATGATGATAAGATTGCTGACTGCTGTCGGAATTTCGGTGCAGATGTCATAATGACATCAGAGTCTTGCCGAAATGGTACTGAACGCTGCAGTGAAGCCCTGCAGAAGCTTGGGAAAAAATATGATATTGTTGTAAATATTCAAGGTGATGAGCCACTTATTGAACCTGAAATAATAGACGGTGTTGTCAAAGCATTGCAGGCAGCGCCAGATGCTGTGTTCAGCACTGCAGTTACGGCTTTAAAGCCTGAAGATGCACTTGATCCAAACAGAGTGAAATGTGTGGTTAGTCATCGTGGTTATGCCATCTATTTTTCTCGAGGATTAATCCCATTCAATAAGTCAGGGAAAGTCAATCATGAGTTCCCTTATTTCCTTCATCTTGGGATTCAGAGTTATGATACAAAGTTTTTAAAGATATACTCAGATCTTGCACCTACTCCATTGCAACTTGAGGAGGACTTGGAGCAGCTAAAAGTTCTTGAGAATGGCTATAAGATGAAGGTAATAAAAGTTGACCATGAGGCCCATGGTGTTGACACTCCTGAAGATGTTGGAAAAATAGAAGCTCTTATGCGCGAGAGAAACTTGTCTTAA 897 0.4348 MAICSSPSSSSSFASSNNSKSWIIPGIMVGVSIVAAAGAHAYLSRFYKFRSRVVGIIPARFASSRFSGKPLVQILGKPMIQRTWERAKLAASLDHVVVATDDDKIADCCRNFGADVIMTSESCRNGTERCSEALQKLGKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTALKPEDALDPNRVKCVVSHRGYAIYFSRGLIPFNKSGKVNHEFPYFLHLGIQSYDTKFLKIYSDLAPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDTPEDVGKIEALMRERNLS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00267 298 FunFam 3-deoxy-manno-octulosonate cytidylyltransferase 51 293 - -
Vivi7g00267 298 CDD CMP-KDO-Synthetase 52 291 IPR004528 GO:0008690
Vivi7g00267 298 Hamap 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 51 293 IPR004528 GO:0008690
Vivi7g00267 298 Pfam Cytidylyltransferase 55 265 IPR003329 -
Vivi7g00267 298 SUPERFAMILY Nucleotide-diphospho-sugar transferases 53 295 IPR029044 -
Vivi7g00267 298 NCBIfam 3-deoxy-manno-octulosonate cytidylyltransferase 55 285 IPR004528 GO:0008690
Vivi7g00267 298 PANTHER 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE 1 297 - -
Vivi7g00267 298 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 45 293 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00267 Vivi-Chr7 15240692 15248387 Dispersed/Transposed