Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00263 ATGGCCACCGTCATCGAATCCATCACCGTCGTTCCTCGCCCTTCTTCTGTCACCCGGTGTTCTCTCAAGCTCTCGCGTTACGTCCGCCTAAAACTCAAGCCCAAGCCCAAGACTATTTTCACTGCTTCGCCTACTCTCAGAATCACTTCCCGCACTTCACGTATAGTGTGCGAAGCCCAGGATACCGCTGTCGATGTGGCTCCTATAACTGAAGCAAATTGGCAATCACTTGTACTTGAATCTGATTCACCCGTTTTGGTTGAGTTCTGGGCTCCATGGTGTGGTCCTTGCAGAATGATCCTCCCTATACTTGATGAACTAGCAAAACAATATGCTGGCAAACTCAAGTGTTACAAACTCAATACCGATGAGAGTCCTTCTACTGCTACACGCTACGGTATTCGAAGTATCCCAACTGTTATGATCTTTAAAGATGGAGAAAAGAAAGACACGGTTGTTGGAGCTGTGCCCAAGTCAACACTAACATCCACCATTGAAAAAATCTTATAA 510 0.4627 MATVIESITVVPRPSSVTRCSLKLSRYVRLKLKPKPKTIFTASPTLRITSRTSRIVCEAQDTAVDVAPITEANWQSLVLESDSPVLVEFWAPWCGPCRMILPILDELAKQYAGKLKCYKLNTDESPSTATRYGIRSIPTVMIFKDGEKKDTVVGAVPKSTLTSTIEKIL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00263 169 NCBIfam thioredoxin 70 168 IPR005746 GO:0015035
Vivi7g00263 169 ProSitePatterns Thioredoxin family active site. 86 104 IPR017937 -
Vivi7g00263 169 ProSiteProfiles Thioredoxin domain profile. 57 169 IPR013766 -
Vivi7g00263 169 PANTHER GEO12009P1 60 168 - -
Vivi7g00263 169 SUPERFAMILY Thioredoxin-like 60 169 IPR036249 -
Vivi7g00263 169 FunFam Thioredoxin 60 169 - -
Vivi7g00263 169 CDD TRX_family 72 166 - -
Vivi7g00263 169 PRINTS Thioredoxin family signature 93 102 - -
Vivi7g00263 169 PRINTS Thioredoxin family signature 85 93 - -
Vivi7g00263 169 PRINTS Thioredoxin family signature 133 144 - -
Vivi7g00263 169 Pfam Thioredoxin 66 167 IPR013766 -
Vivi7g00263 169 Gene3D Glutaredoxin 66 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00263 Vivi-Chr7 15179050 15179880 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g00263 7 15179050 15179880 Vivi7g00263 7 15179050 15179880 ECH