Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00204 ATGGGAGCTAGGCTCAATACACTCAACTTCTGGAGACCAAGTATCTGTTTCACTCTCAAACGGAAAAGTAAGTTACTATGTTTAGTATCTGTTTCACTCTCAAACGGAAAAGTGCTCAATTTACCTAGATCAGAACTTGTACCAGCTAATCCCAATCTTTTAGATGCCGTGGATGACCTTATTAAACTCGCTTATTTGAATCACCCCTCCGTTCTTCACAATCTTAGGTTTAGATATTCTCATGACATGATTTATAGTAAAGCAGGGCCCATTTTAATTGCACTCAATCCTTTCAAAGATCTCCAAATTTATGGAAATGATTACGTTTCCACTTATAGGCAACAACTTGTTGATACTCCTCATGTTTATGGTATGGTAGATGCAGCTTATAACCAGATGATGACAAATGAAGTAGATCAGTCCATTATCACAAGTGGTGAGAGTGGATCTGGAAAGACAGAGACAGCTAAAATTGCTATACAATACTTAGCTTCTCTTGGTAGTGGCAGTAGTGGGACAACAAATGTTGTTCTTCAAACAAATTGTATACTAGAAACTTTTGGGAATGCAAAAACATCTGTGAATGACAACTCATCCAGATTTGGAAAGTTTATGGAAATTCATTTCAGTGCCACGGGTAAAATATGTGGGGCTAAAATTCAAACCTATTTGTTGGAAAAGTCAAGAGTTGTTCAAGTGGCCAATGGTGAGAGGTCGTATCATGTACTTTATCAACTTTGTGCTGGATCTTCATCTAGTCTTAAAGAGAGACTAAATCTTAGAGCAGCCCATGAATATAAATATCTAAATCAAAGTGACTGCATCACTATTGGTGGTATTGACGATGCTAGAAACTTTCATCAGCTGATGGAAGCATTTGATGCTGTTCGAATTAGTAAAGAGGACCAAGAGCTGATCTTTAAAGTGCTTGCTGCAATATTATGGCTGGGAAATATATCATTCAAAGTCACTGACAGTGAAAATCACATCGAGGTTGTGGGTGATGAAGCTGTAACCAGTGCTGCCCTGCTGATGGGTTGCAGTTCCCAGGACTTAATGGCAGCATTATCTACCCATAAAATCCAATCTGACAAAGAAACTGTTGTTGCCAAAAGATTGACATTATTGCAGGCCATTGAAACAAAAGATGCAATTGCCAAATTTATTTATTCAAGCTTGTTTGAATGGATAGTACAACAACTTAACAGGTTACTTGAAGTGAATGAAAAGCATACAGAGAAATCCATTAGTATCCTTGATTTTTATGGGTTTCAGTCATTCCAGTTTCTTGTTTCTTACTTTCAGAAGAACAACTTCGAGCAATTTTGTATAAATTATGCTAATGAAAGGCTTCAACAACATTTTAATCGGCATCTGTTTAAACTTGAGCTGGAGGACTGTGAATCAGATGGCATTGATTGTTCAGTATTAGATTTTGGGGACAATCAAGAGTGCTTGGATCTATTTGAGAAGAAACCTCTCAGTCTACTCTCTTTATTGGATGATGAATCAAATTTTGCTGAGGCTTCTGATTTAACATTTGTCAACAGACTTAAGGACCTCCTGGAAGCTAATAATTGCTTCAAAGGGGAAAGAGGCAGGGCTTTTAGTGTACGTCACTATGCAGGGGAGGTTTTGTATGATACTAATGACTTTCTAGTAAAGAACAGAGATACGTATGATAATTCTATTCAACTCCTTTCATCATGTAATTGTGAACTGCTGAAGTTGTTCTCCAAAGTGATTAACCAACCCGAGGAGCAAGGAAACTCCACTTTCCATGTTGGAGCACTATACTCACAGAAGAGAGGTGTTGGAACAAAGTTCAAGGATCAATTGTTTAAGTTGATTCATCAATTGGAGAACACCACTCCTCACTTTATTCGCTGCATAAAGCCAAATACTACGAACCTTCCTGGAATTTATGACAAGGAACTTGTCCTACAACAGCTCAGATGTTGTGGAGTTCTAGAAGCTGTTAAAATTTCAAAGGCTGGATTTCCTACTCGAGTGAACCATCAAGAATTTTCCAGAAGGTACGGGTTTCTGCTTTCTAAGACTGACATACCTCGGGATCCGTTGAGCGTCTCAGTTGCAGTTTTGCAAAAATTTAATATCCCTTCTGAAATGTACCAAGTTGGCTACACAAAACTATATCTTCGAGCAGGGCAGATTGGTGCGCTGGAGGATAAGAGAAAACAGTTTTTGCGGGGAGTACTTGGGATTCAAAAATGCTTCCGTGGTCATCAAGCCCGCAGTTATTTCTGTAAACTTAGGAATGGAGTGACAGCATTACAATCATTTATACGTGGAGACATTGCAAGAAAGAAACATGGTGTTTTGATGAAATCTTCCATAACAATTTATTCTAAAAAACTAGAGGAGATTTATGGAATCATAGTACTTCAATCTGTGATTCGTGGGTGGTTGGTTCGAAGGGATTCTAGTTACATCAATAAATTGAGGAACTATCATGAAAATGAAAATTCTCGACGGAACTTTTGTGTTAAGATGCCAGAAGTTGAGCAGGATTTGTCCCAAGAGCTGCTTCAGAACATGCCTTCAGCTTTAGCAGAACTACAAAAACGTGCATACGAAGCAGAAGCAGTTGTGGAGCAAAAGGAAGAAGAAAATACAGAATTGAGGGAACAACTAAAACAATCGGAGAGAAAGAGGGTTGAATATGAGAAAAAGATGAAGTCAATGGAGGAGGTGTGGCAAAAGCAGATGGCATCCTTGCAATCGAGTCTTGTTTCTGCTAGAAAGAGCCTTGCTTCAGAGAATGGCACTGTTCAACCTGTAAGACATGAACTTGTGTCACCTCGCTACTATGATTCTGAAGATGCCTCTTCTATGGGATCTCGAACAACTAGTGGGAGCACACCTATGTTGCTTTCTGGTAGTTTCTCCGTCTCTGATGCGGGGAGGCAAGCTAATGGTACTTTGACAACTGTAAGCAATCTGATGAAGGAATTTGAGCAGCAAAGACAAACCTTCAACGATGAAGTTAAAGCTTTGAATGAGATTAAACCAGGGCAGTCTGCCAACACGAGCTCCGCTGATGAACTTCGGAAACTTAAACAAAGATTCGAGGGATGGAAGAAACAATATAAGGTTAGATTACGGGAAACAAAAGCAAGGCTTTCCGAATCCGAAAAAAGTCGACGGACATGGTGGGGAAAATTAAGCTTAAGAGCATAA 3201 0.3914 MGARLNTLNFWRPSICFTLKRKSKLLCLVSVSLSNGKVLNLPRSELVPANPNLLDAVDDLIKLAYLNHPSVLHNLRFRYSHDMIYSKAGPILIALNPFKDLQIYGNDYVSTYRQQLVDTPHVYGMVDAAYNQMMTNEVDQSIITSGESGSGKTETAKIAIQYLASLGSGSSGTTNVVLQTNCILETFGNAKTSVNDNSSRFGKFMEIHFSATGKICGAKIQTYLLEKSRVVQVANGERSYHVLYQLCAGSSSSLKERLNLRAAHEYKYLNQSDCITIGGIDDARNFHQLMEAFDAVRISKEDQELIFKVLAAILWLGNISFKVTDSENHIEVVGDEAVTSAALLMGCSSQDLMAALSTHKIQSDKETVVAKRLTLLQAIETKDAIAKFIYSSLFEWIVQQLNRLLEVNEKHTEKSISILDFYGFQSFQFLVSYFQKNNFEQFCINYANERLQQHFNRHLFKLELEDCESDGIDCSVLDFGDNQECLDLFEKKPLSLLSLLDDESNFAEASDLTFVNRLKDLLEANNCFKGERGRAFSVRHYAGEVLYDTNDFLVKNRDTYDNSIQLLSSCNCELLKLFSKVINQPEEQGNSTFHVGALYSQKRGVGTKFKDQLFKLIHQLENTTPHFIRCIKPNTTNLPGIYDKELVLQQLRCCGVLEAVKISKAGFPTRVNHQEFSRRYGFLLSKTDIPRDPLSVSVAVLQKFNIPSEMYQVGYTKLYLRAGQIGALEDKRKQFLRGVLGIQKCFRGHQARSYFCKLRNGVTALQSFIRGDIARKKHGVLMKSSITIYSKKLEEIYGIIVLQSVIRGWLVRRDSSYINKLRNYHENENSRRNFCVKMPEVEQDLSQELLQNMPSALAELQKRAYEAEAVVEQKEEENTELREQLKQSERKRVEYEKKMKSMEEVWQKQMASLQSSLVSARKSLASENGTVQPVRHELVSPRYYDSEDASSMGSRTTSGSTPMLLSGSFSVSDAGRQANGTLTTVSNLMKEFEQQRQTFNDEVKALNEIKPGQSANTSSADELRKLKQRFEGWKKQYKVRLRETKARLSESEKSRRTWWGKLSLRA 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00204 1066 Gene3D - 431 623 - -
Vivi7g00204 1066 Coils Coil 1034 1054 - -
Vivi7g00204 1066 CDD MYSc_Myo8 69 721 IPR036022 -
Vivi7g00204 1066 PANTHER MYOSIN 50 1051 - -
Vivi7g00204 1066 Gene3D - 739 784 - -
Vivi7g00204 1066 ProSiteProfiles IQ motif profile. 737 764 IPR000048 GO:0005515
Vivi7g00204 1066 Gene3D Myosin VI head, motor domain, U50 subdomain 299 601 - -
Vivi7g00204 1066 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Vivi7g00204 1066 ProSiteProfiles IQ motif profile. 795 823 IPR000048 GO:0005515
Vivi7g00204 1066 Coils Coil 857 905 - -
Vivi7g00204 1066 PRINTS Myosin heavy chain signature 85 104 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00204 1066 PRINTS Myosin heavy chain signature 475 503 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00204 1066 PRINTS Myosin heavy chain signature 182 209 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00204 1066 PRINTS Myosin heavy chain signature 139 164 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00204 1066 PRINTS Myosin heavy chain signature 422 450 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00204 1066 SMART MYSc_2a 49 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00204 1066 ProSiteProfiles Myosin motor domain profile. 55 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00204 1066 Pfam IQ calmodulin-binding motif 799 813 IPR000048 GO:0005515
Vivi7g00204 1066 Pfam IQ calmodulin-binding motif 739 755 IPR000048 GO:0005515
Vivi7g00204 1066 Gene3D - 238 297 - -
Vivi7g00204 1066 Gene3D - 666 734 - -
Vivi7g00204 1066 Coils Coil 989 1009 - -
Vivi7g00204 1066 FunFam Myosin heavy chain 238 294 - -
Vivi7g00204 1066 SMART iq_5 794 816 IPR000048 GO:0005515
Vivi7g00204 1066 SMART iq_5 734 756 IPR000048 GO:0005515
Vivi7g00204 1066 SMART iq_5 757 779 IPR000048 GO:0005515
Vivi7g00204 1066 Gene3D Kinesin motor domain 58 662 IPR036961 -
Vivi7g00204 1066 Pfam Myosin head (motor domain) 57 721 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00204 1066 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 782 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00204 Vivi-Chr7 11750098 11779002 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00204 11 1061 Myosins gene family AT5G54280 55.210 0.0 1199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g00204 7 11750098 11779002 Vivi7g00204 7 11750098 11779002 ECH