Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00061 ATGCTTCACCACAACACAAACTCCATGGTTCATTTCTTGCTTCTAGCATCAATGATAATTGGAATTGGAATGTCAGATTCATCGAAAGACAAACAAGAATGCACAGAACAATTGGCAAGTCTAGCAACATGTCTCCCTTATGTTGAAGGTGAAGGAAAAACTCCAGCAACAGATTGTTGTGATGGTCTCAAGACACTCCTTAAGACAAACGAAAAGTGTTTGTGTTTAATTATCAAAGACCGTAATGATCCTGATTTGGGTGGTATAGTTATTAATGTCACTTTGGCTTTGAATCTTCCTAAAGTTTGTAATGCCCCTGCCAATGTCTCTAGATGTCCGGAGTTGCTGCACATGGATCCAAAATCAGCAGAGGCTCAAGTTTTTTATCAATTGAAAAATGGCTCCACAAATATTGGCCCTAGTGCTGCACCTAGTCCTTCAGATGGAGCAAGCACTCATGCAAACAGTACTACAGAAAAGAGTGACGCATTCAGCAAAGAGAAGAACTTGTTCGGATTACAAGTTTTGGCTGTGGGGATTTCGGTTTGGTTTTTATTGGGCTCTACAGATGGAAATATTTTTAAGATACCAATGTGA 597 0.397 MLHHNTNSMVHFLLLASMIIGIGMSDSSKDKQECTEQLASLATCLPYVEGEGKTPATDCCDGLKTLLKTNEKCLCLIIKDRNDPDLGGIVINVTLALNLPKVCNAPANVSRCPELLHMDPKSAEAQVFYQLKNGSTNIGPSAAPSPSDGASTHANSTTEKSDAFSKEKNLFGLQVLAVGISVWFLLGSTDGNIFKIPM 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00061 198 SMART aai_6 34 112 IPR016140 -
Vivi7g00061 198 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 113 IPR036312 -
Vivi7g00061 198 CDD AAI_LTSS 41 104 - -
Vivi7g00061 198 MobiDBLite consensus disorder prediction 139 159 - -
Vivi7g00061 198 Gene3D - 31 110 IPR036312 -
Vivi7g00061 198 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 19 154 IPR043325 -
Vivi7g00061 198 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 31 112 - -
Vivi7g00061 198 Pfam Probable lipid transfer 16 112 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00061 Vivi-Chr7 3231618 3232644 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00061 26 186 Acyl Lipid Metabolism Gene Families AT2G44300 48.864 8.13e-55 171