Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00053 ATGTCTTTCTCATGTGTGAAGAGATTTTTCAAGCGGTTTTGGGTTGTTGACGAATTCCATACCGGAACTTTTCCGTATGGCAACTTTCTGTCTGCTGATATCTTGCCTTCTCTTGGAGCAAGAATTAACCCGGAAACAAGGTTAAGAAAACACATAATCTCTCCTTTCAATCCAAAGCATAGGGCTTGGGAGATGTGGTTGATACTTCTGGTGATTTATTCTGCATGGATATGCCCCTTTCATTTTGCTTTTCTACCTGATAAGCATCCGACGCTGCTAATCATCGATAACATTATCAATGCTTTCTTCGCAATCGATATAGTGTTGACATTCTTTGTTGCTTATGTTGATGATCATTCTTACGTTCTTATTGATGAGCCAAAGAAAATTGCAGTCAGGTACCTATGTACTTGGTTTATCTTTGATGTTTCTTCGACGGCGCCTTTGCAATCTATTATCTCCTTGTTCACAAAACATAGCGGCGCGATTGGGTTCAAACTTCTTAATATGCTTCGGTTATGGCGTCTGAGACGAGTCAGTTCTCTTTTTGCAAGGCTAGAGAAAGATATTCGCTTCAATTACTTTTGGACTAGGTGTATAAAGCTCATTGCTGTGACATTGTTTGCAATACACTTTGCTGGATGCTTTATCTATTTCATTGCAGACAGGCACACTGATTCAAGTGATACATGGATTGGTTCTGTGTATCCAAAATTCAAAGAAACATCTATTTGGGATAGATATGTGACATCAATTTATTGGGCTATTGTCACACTCACTACAACTGGGTATGGCGATTTGCATCCTGTCAATCCTAAAGAAATGATTTTTGATATTTTCTTCATGCTGTTCAACTTGGGATTAGATGCTTATATCATTGGAAATATTACAAATCTTGTTGTTCAATGGACAAGCCATACCAGAACTTTTAGAGATACAGTGAGAGCAGCTTCTGAATTTGTAACAAGAAATCATCTGCCTCATGATACACAAGATCAAATATTATCACACTTATCTTTGAAGTTCAAGACAGATGGATTAAAGCAACAAGAAACAATAAAGGGCATGCCAAAAGCAATTCGCGCCGCCATTTCACACCAGCTGTTTTATCCAGTTGCGCAGAAATCCTATCTCTTCCAACAAGTTTCACATGACTTTCTTTTTCAACTGGTTACAGATATGGAAGCTGAGTATTTTCCACCAAAAGAATATGTTATACTGCAGAATGAATCTCCAACAGATCTTTACATGCTTGTTTCAGGGGCAGTGGAGCTCATTCACACAGTTGACAGTTATGATCAAGTTTCGAAGATGGAAAATGCAGGAGATACGTTTGGGGAGATTGGAGTTCTATACAACAGACCACAGCCTTTCAGTGTTAGGACGAGAGAGCTTTCGCAAATATTGAAACTTAGCCGAACTTCGTTGATGAATGTCATACATGCAAATCAAGAAGCAGCACCAGTTATAATGACAAATCTTTTTATGATGCTAAAAGCTGAAAAAGATTTTAAATATCCACATATAAGCCCTAGATTGGCACTTCATGAGATGCTTCATGGGAACAACATAAGTGGAAATCCATGTTTTGCATGTACAAATGTTTCGCCCGGGGAAGCTATGTTATATGACATGATGCCAAACATGTTGGATGAAAATCAGCAAGAAAAAGAAGCGAATGAAAAGAGACTAAATCGCGTTAGATGGAAACAGAAATCTCAAGACGACGAGCAACAAAACACGACTCCTCCTCATGAGTATGGAACAAGTAATCATTCAATCAATAAGAGAGTTACCATCCACTTTCTTGGCCAAGACGGAACGGCCTTGCCACCACAAGGTGGAAAACTGATAACTCTACCTGATTCAATAGAAGAGCTTCTCGAGATTGCAGGAAAAAAGTTTGGAATGCCAAAGCCAAACATAATCAAAAGTGCAGAAGATGCGGAGATTGATGATTTATGTGTCATTCGAGACAATGATCATCTGTTTTTTCTTTGCCACGACAAAGAAGTTTTGACCTAA 2025 0.3862 MSFSCVKRFFKRFWVVDEFHTGTFPYGNFLSADILPSLGARINPETRLRKHIISPFNPKHRAWEMWLILLVIYSAWICPFHFAFLPDKHPTLLIIDNIINAFFAIDIVLTFFVAYVDDHSYVLIDEPKKIAVRYLCTWFIFDVSSTAPLQSIISLFTKHSGAIGFKLLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCIKLIAVTLFAIHFAGCFIYFIADRHTDSSDTWIGSVYPKFKETSIWDRYVTSIYWAIVTLTTTGYGDLHPVNPKEMIFDIFFMLFNLGLDAYIIGNITNLVVQWTSHTRTFRDTVRAASEFVTRNHLPHDTQDQILSHLSLKFKTDGLKQQETIKGMPKAIRAAISHQLFYPVAQKSYLFQQVSHDFLFQLVTDMEAEYFPPKEYVILQNESPTDLYMLVSGAVELIHTVDSYDQVSKMENAGDTFGEIGVLYNRPQPFSVRTRELSQILKLSRTSLMNVIHANQEAAPVIMTNLFMMLKAEKDFKYPHISPRLALHEMLHGNNISGNPCFACTNVSPGEAMLYDMMPNMLDENQQEKEANEKRLNRVRWKQKSQDDEQQNTTPPHEYGTSNHSINKRVTIHFLGQDGTALPPQGGKLITLPDSIEELLEIAGKKFGMPKPNIIKSAEDAEIDDLCVIRDNDHLFFLCHDKEVLT 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00053 674 SUPERFAMILY Voltage-gated potassium channels 55 301 - -
Vivi7g00053 674 MobiDBLite consensus disorder prediction 555 591 - -
Vivi7g00053 674 Pfam Cyclic nucleotide-binding domain 397 481 IPR000595 -
Vivi7g00053 674 FunFam Potassium channel KAT3 62 302 - -
Vivi7g00053 674 MobiDBLite consensus disorder prediction 576 591 - -
Vivi7g00053 674 CDD CAP_ED 378 487 IPR000595 -
Vivi7g00053 674 ProSiteProfiles cAMP/cGMP binding motif profile. 378 497 IPR000595 -
Vivi7g00053 674 Coils Coil 550 570 - -
Vivi7g00053 674 Gene3D Jelly Rolls 346 508 IPR014710 -
Vivi7g00053 674 ProSiteProfiles KHA domain profile. 597 674 IPR021789 -
Vivi7g00053 674 PRINTS EAG/ELK/ERG potassium channel family signature 292 301 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi7g00053 674 PRINTS EAG/ELK/ERG potassium channel family signature 73 80 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi7g00053 674 PRINTS EAG/ELK/ERG potassium channel family signature 96 106 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi7g00053 674 PRINTS EAG/ELK/ERG potassium channel family signature 107 116 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi7g00053 674 PRINTS EAG/ELK/ERG potassium channel family signature 274 285 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi7g00053 674 PRINTS EAG/ELK/ERG potassium channel family signature 248 265 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi7g00053 674 MobiDBLite consensus disorder prediction 555 575 - -
Vivi7g00053 674 Gene3D - 61 302 - -
Vivi7g00053 674 SMART cnmp_10 378 495 IPR000595 -
Vivi7g00053 674 Pfam Ion transport protein 60 307 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vivi7g00053 674 FunFam Potassium channel KAT2 366 502 - -
Vivi7g00053 674 Pfam KHA, dimerisation domain of potassium ion channel 596 665 IPR021789 -
Vivi7g00053 674 SUPERFAMILY cAMP-binding domain-like 305 494 IPR018490 -
Vivi7g00053 674 PANTHER POTASSIUM CHANNEL AKT1 28 502 IPR045319 GO:0005249|GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00053 Vivi-Chr7 2839971 2843653 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00053 1 665 Ion Channels AT5G46240 56.914 0.0 783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g00053 7 2839971 2843653 Vivi7g00053 7 2839971 2843653 ECH