Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03532 ATGAACATGTCTGAGACTGAGACAGAGAAGAATCATCCTGGTATTAAGCTGTTTGGATGGAAGATTCCGTTGCCGGAATGTCGAATTCCGGTTAACTCTCCACCAATGGATACTTGCAGCACTAAAAAGAAAACATTAGTGGAAATGCTTTCTGCGGAAAAAACTGAGCCACAAGACAATTCTTCTGATTCAATGGATAGTAAACAAGAGTCTCGAAGTGATACGCAGGAAAAAGAGCCGATAGTAAACTCCGAGCAAGCTGAAGATAACGCGGAGTCGGGTGATACTGATCAAGATAAAGTCTTGAAGAAACCGGACAAGATTGTTCAGTGTCCGCGGTGCAAAAGTTGGGATACCAAGTTTTGTTATTTCAACAACTATAATGTGAACCAACCTCGGCATTTCTGTAAGAATTGCCAGAGGTATTGGACTGCTGGCGGAACGATGAGAAATGTTCCCATAGGTGCTGGGAGGCGGAAGAATAAGCATCTTGCCTCTCAGTACCGGCAAGTTATAGTAAACTCGGATGGAATTCCGATCTCCAGGCAAGAAACTACGAGTTTATCTGGTCATCACCGTGTGTTGACGGATAACGAGACTGTGTTGAAATTTGGTCCAGATACTCCTCTTTGCGAATCAATGCATTCGATGCTTAATGTTCGAGACCATAATAGAAGTACTGATGCAAATTCTATTGGTAATGGGCAACATAGAGAGGAACCAACCTTATGTGGATCTTCGGTTACAAACACCGGTACTCAAGGAAACGAGTTATCGAATCACAATGCACCAAATTGGTTGCAGTGCTATCCTGTTCCTCCATGGGTATTACCGATGAATCCAGGTTGGAGTAACGGTTCTTCCATGGCAGCAGTTCATCCGACTTCGGCATCCATGTGCAACCCTTACAGCGCTGCTCCAACTGCAATGCAATGGTGTCCGGCGCCTATGTTTGCCATGCCGGGAATTAGGCCACAAAACATACCTTTGCAACTTGTATCAACCTCACCCTGGAATGGTCCATCACTCTGCCTCTCGCCGCCTTCCTCCACAAGTAACAGCTGCTCGGGTAATGGCTCGCCTACCCTAGGTAAACACGCTAGAGAAACAGTTCTCGCAGATGGAGACAAATCAGACAAGGTTATTCCGGTTAGAAAAACGATTAGAATTGATGTCACAAATGAGGTCCCGAAAAGTCCTCCTCCGGTTAATGGAGAAGGCAAAGACATTGTGTTGGGTGCATCTCAGATTTTGGAAGCCTAA 1263 0.4529 MNMSETETEKNHPGIKLFGWKIPLPECRIPVNSPPMDTCSTKKKTLVEMLSAEKTEPQDNSSDSMDSKQESRSDTQEKEPIVNSEQAEDNAESGDTDQDKVLKKPDKIVQCPRCKSWDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPIGAGRRKNKHLASQYRQVIVNSDGIPISRQETTSLSGHHRVLTDNETVLKFGPDTPLCESMHSMLNVRDHNRSTDANSIGNGQHREEPTLCGSSVTNTGTQGNELSNHNAPNWLQCYPVPPWVLPMNPGWSNGSSMAAVHPTSASMCNPYSAAPTAMQWCPAPMFAMPGIRPQNIPLQLVSTSPWNGPSLCLSPPSSTSNSCSGNGSPTLGKHARETVLADGDKSDKVIPVRKTIRIDVTNEVPKSPPPVNGEGKDIVLGASQILEA 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03532 420 MobiDBLite consensus disorder prediction 59 85 - -
Vivi6g03532 420 MobiDBLite consensus disorder prediction 26 101 - -
Vivi6g03532 420 Pfam Dof domain, zinc finger 106 163 IPR003851 GO:0003677|GO:0006355
Vivi6g03532 420 ProSiteProfiles Zinc finger Dof-type profile. 109 163 IPR003851 GO:0003677|GO:0006355
Vivi6g03532 420 PANTHER CYCLIC DOF FACTOR 2 10 400 IPR045174 GO:0003700|GO:0006355
Vivi6g03532 420 MobiDBLite consensus disorder prediction 344 363 - -
Vivi6g03532 420 ProSitePatterns Zinc finger Dof-type signature. 111 147 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03532 Vivi-Chr6 128169100 128171493 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03532 13 399 C2C2-Dof Transcription Factor Family AT5G39660 33.860 1.38e-49 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi6g03532 zf-Dof 1.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03532 - - cam:101500722 594.734