Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05078 ATGGTGAAAATCACTGAAGAAACCAACCTATCTGATCAACAAGAAGTTGAAGAAGAAATAGACTATGATGAGCTGAAGAAACGCATGTGGAAGGACAAAATCCTACTACAGAAGCTTAAGGAGAAAGGCAAGAAACAAGAACAAAACCAGCAAGCAAAAGATGAAGCATCGAGACGAAAGAAGATGTCAAGAGCACAAGATTCAATCCTCAAATATATGATGAAGATTATGACAATATGCAAAGCTCAAGGTTTTGTCTATGGTATTATCCCAGAGAATGGAAAACCAGTGACAGGTTCTTCTGAAAGCTTGCGTGAGTGGTGGAAAGAACAAGTCAAGTTCAGTCAAAATGCACCAGAAGCTGTTTCCAAATACTTATTATTACCACCACCACCACCACTCTTTGAAAATCAACAAGATTCAATTTCATCATACATGCATTTACTTTATGAGTTACAAGATACTACTTTAGGTTCATTGCTTTCAGCTCTCATGCAACACTGTGTGCCACCACAAAGAAGGTTCCCTCTTGAGAGAGGTTTGGCTCCCCCTTGGTGGCCAAATGGAAAAGAACAGTGGTGGGGTCAACAAGGTGTTGTGGCAGAAAAACAAGGTCCACCACCTTATAGAAAGCCTCATGATTTGAAAAAGGGTTGGAAAGTTTCTGTGTTGGCTGCAATTATCAAACACTTGTCTCCTGATGTTGATAAAGTTAGAAGGCTAGTGACTCAGTCCAAGACTTTGCAAGATAAGATGACTGCTAAAGATAGTGCAACTTGGTGCAAAGTTATGAACCAAGAACAAGCTTTGCTTTCAGAAATCACTAGAAAGTGTCTCAAGATATCAGAAGAAGGTGAAAGCTCTAGTAGTGTTGTTACACATGTTTTGAATGAGAAGAGGAAGAGTGAGTTTGATTTTGATTTTGATGTTGATTTTGATAAGATGTATTCCTGTCAATATTCTGAGTGTCCACAAAGTGAATTGTGTATGGGATTTTCAGACAAGAGTTCAAGGGTGAATCATGAATCCTTCTGTTCTTACAGATCAGAACAAGGTCATGTTCCTTTTCATGATTATCTGTCAGATGATTGGTTTAATATGGATATAGCAGGAACTAGTAATCAGAATCAGGATCATGGAAACCTCGTTGGGAATGTTAATGAGTTGAGAGAGATTGTGGATAGGACAGTAGAAGGTTATGGTGAATTTTGGCTTAATGGCATGCAAGATCTTGAATTGCACATGGGAGTGAACATGGAAAGAGATAATGTGGACTTGAATCAAAATCAAGAACAAGATACCACATTAAGTCACGAAGAAACCTCAATTTGGGACTTGACATACCATTAG 1350 0.3852 MVKITEETNLSDQQEVEEEIDYDELKKRMWKDKILLQKLKEKGKKQEQNQQAKDEASRRKKMSRAQDSILKYMMKIMTICKAQGFVYGIIPENGKPVTGSSESLREWWKEQVKFSQNAPEAVSKYLLLPPPPPLFENQQDSISSYMHLLYELQDTTLGSLLSALMQHCVPPQRRFPLERGLAPPWWPNGKEQWWGQQGVVAEKQGPPPYRKPHDLKKGWKVSVLAAIIKHLSPDVDKVRRLVTQSKTLQDKMTAKDSATWCKVMNQEQALLSEITRKCLKISEEGESSSSVVTHVLNEKRKSEFDFDFDVDFDKMYSCQYSECPQSELCMGFSDKSSRVNHESFCSYRSEQGHVPFHDYLSDDWFNMDIAGTSNQNQDHGNLVGNVNELREIVDRTVEGYGEFWLNGMQDLELHMGVNMERDNVDLNQNQEQDTTLSHEETSIWDLTYH 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05078 449 Gene3D - 51 128 IPR023278 GO:0003700|GO:0005634
Vivi5g05078 449 Gene3D - 138 278 IPR023278 GO:0003700|GO:0005634
Vivi5g05078 449 Pfam Ethylene insensitive 3 23 267 IPR047091 GO:0003700
Vivi5g05078 449 Coils Coil 35 55 - -
Vivi5g05078 449 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 4 307 IPR006957 GO:0003700|GO:0005634
Vivi5g05078 449 SUPERFAMILY DNA-binding domain of EIN3-like 146 271 IPR023278 GO:0003700|GO:0005634
Vivi5g05078 449 FunFam Ethylene insensitive 3-like 1 140 278 - -
Vivi5g05078 449 MobiDBLite consensus disorder prediction 41 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05078 Vivi-Chr5 151520393 151521992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05078 1 446 EIL Transcription Factor Family AT5G10120 48.950 7.70e-137 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vivi5g05078 EIN3 2.1e-111 No_clan