Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05049 ATGTCTTTTATTGTGTTCGTGATAGCTCTCTTTATAGTTATCATGGTTACTTTAATGTACCAAAACTCTAGTTTTGAACAACTTGAGATGCTTTCAAAAGACATTGCAATGAAGGATATGGTTGAGAAGAACATTACAGCTGGAGGGCCAAATGCTACAACTAATGAGTCTAGTTTGAGACAAAATGTAACACAGGAAAAAGTTGGAGCAAAAGGTGAGATTGATACCAAATTCAAAAAATCTACGGGCTCTAAAAATATTTTGTTGACACATTCAACAAATAATTCTACTCCAACCTCGTCAAAAGAGATCATTGATGATAACAAAGAGAGATTGCTTGATGGACTCTTAGTTCCTGGATTTGATAAAGCATCATGCATAAGTAGGTTACAATCTCATTTTTACCACAAATCTTCCCCACACAAACCTTCTCCATATTTGATATCCAAATTACGAAAATATGAAGAAATTCATAGAAAATGTGGACCAAACAGTAGAGCTTACAATAGAGATATGGAAATTATTGCAAACTCTAAGAATAATAATGGTTCGTCATGTGCTTCAACAACTTGCAAATACATTATTTGGGTACCCGCTAATGGTTTAGGTAACCAAATAATTAGCATGGCTTCATCATTTCTTTACGCGCTCCTAACAGATCGTGTCATGCTCGTAAAATTTGGAAAAGACAAAGAGGGCTTATTTTGTGAGCCATTTTTGAATTCAACTTGGTTGTTATCGAAGGATTCACCTTTTTGGAATGCAGAAAATATTCAATCATATCAAAGAACTATAGACATGGAACTCTCCAATACATTAAATGAAGATTTGCCATTAGCTATGCACGTGGACTTAAGATATAGTCCATCACATGATGAGAGATTTTTTCATTGTGACCACAGTCAATTTCTCCTCAGTAAAATTCCTCTACTGTTTTTGGAAGCAGGTCAGTATTTTGTACCTTCTTTTTTTATGACACCAATTTTTCAAAAAGAATTAAGCAAAATGTTTCCAGAAATTACTTCAATTTTCCATCATTTGGCACGCTACCTATTTCACCCTTCAAACAAAGCGTGGAAACTAATCACTAGTTTCTACCAACAACACCTTGCTAAAGCGAATGAAAGAATTGGACTTCAAATAAGAGTATTGAATACTAAATCAACTCCACATGAACTTTTCATGAATCGAATTCTGAATTGCACATTACATAATAAATTACTTCCAAAAGTATTTGATACAAAAAATACTTCATTGTCTTCCAATGGCAAAAACAAGACAATAATAAAGGCTGTTCTTGTGGCATCATTATATCCGCAATATAGTGAGAATTTGAAGATGATGTATATGAATAAATCAACCGTTACTGGAGAAGTAATTGAGGTTTATCAACCAAGTAGTGAAGAGGAACAAATATTTGATGATAATGAGCATAATATGAAGGCTTGGGTTGATATGTATTTACTAAGTTTATCTGATGAATTAGTGACTACATATCAATCTACTTTTGGCTATGTTGCTAAGGGATTAGGAAACTCGAAACCATGGATTCTTTATAATCCTGCTAATAGCATGGAGATTTGTGAACGTGAATTTACACCGGAGCCGTGTTATCATTATCCTCCTTCACATTATTGTGATAGTGAAGATGTTATTGAAGATGTTGCTTCCTCTTTTCCTAATATTAGACATTGTAAGGATTATTCTTTTGGCTTGAAGCTAGTTAATAGTTCCGTATAA 1740 0.3356 MSFIVFVIALFIVIMVTLMYQNSSFEQLEMLSKDIAMKDMVEKNITAGGPNATTNESSLRQNVTQEKVGAKGEIDTKFKKSTGSKNILLTHSTNNSTPTSSKEIIDDNKERLLDGLLVPGFDKASCISRLQSHFYHKSSPHKPSPYLISKLRKYEEIHRKCGPNSRAYNRDMEIIANSKNNNGSSCASTTCKYIIWVPANGLGNQIISMASSFLYALLTDRVMLVKFGKDKEGLFCEPFLNSTWLLSKDSPFWNAENIQSYQRTIDMELSNTLNEDLPLAMHVDLRYSPSHDERFFHCDHSQFLLSKIPLLFLEAGQYFVPSFFMTPIFQKELSKMFPEITSIFHHLARYLFHPSNKAWKLITSFYQQHLAKANERIGLQIRVLNTKSTPHELFMNRILNCTLHNKLLPKVFDTKNTSLSSNGKNKTIIKAVLVASLYPQYSENLKMMYMNKSTVTGEVIEVYQPSSEEEQIFDDNEHNMKAWVDMYLLSLSDELVTTYQSTFGYVAKGLGNSKPWILYNPANSMEICEREFTPEPCYHYPPSHYCDSEDVIEDVASSFPNIRHCKDYSFGLKLVNSSV 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05049 579 FunFam Galactoside 2-alpha-L-fucosyltransferase 189 240 - -
Vivi5g05049 579 Pfam Xyloglucan fucosyltransferase 101 546 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vivi5g05049 579 PANTHER FUCOSYLTRANSFERASE 2-RELATED 8 576 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vivi5g05049 579 MobiDBLite consensus disorder prediction 47 65 - -
Vivi5g05049 579 Gene3D - 360 532 - -
Vivi5g05049 579 Gene3D - 188 242 - -
Vivi5g05049 579 MobiDBLite consensus disorder prediction 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05049 Vivi-Chr5 151106706 151108948 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05049 108 575 Xyloglucan Fucosyltransferase1 AT2G03220 45.702 3.25e-142 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05049 K13681 - gmx:100809919 631.328