Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04745 ATGAAAGGAGGGATTCATGAGAAACAACTACCTGCATGGTTGGAGAGATTAATGGGTGAAACATTCTTTGGTGGTTGTGGGGTCCACCAACATAGAAAGAAGAACGAGAAGAACGTCCTTTGCTTACACTGTTGTCTCTCTATATGTCCTCACTGTCTCCCTTCCCACCGCCATCACCCTCTCCTTCAGGTGAGAAGGTATGTTTATCATGACGTGGTTCGACTGAATGATCTTGAAAAGCTCATAGATTGTTCCAATATTCAAGGATATACGATTAACGGTGCGAAAGTGATATTCTTAAAAGAGAGAGTTCAGTCAAGGTCATGCAAACATACTGCCAACGTTTGCTGCTCTTGTGACAGGATTCTTCAGGAGCCCTTCCATTTCTGTTCGCTCTCATGCAAGGTTGATTATATGCTATGCAAGGGCGAAAGGTTATCGAGGATATTACATCAATTCAATGAATCAGATTTTTCATATTATTCCCAGTTCGAGGGTTTAAGGGTTGATAGCTCTGAAGTTATTGATGAAGATCATAATGCCCATTTTGCCCCTACTACTGAGGAAGCTACAAGCCGTTCTATGAATAATAGTATTTCATCATGTGAAGAAGATCTCAACAATAGTAAAGGCAATGGTAATTTCTTCCTCTCTCTTGGAAGCTGCAGGAGAAAGGGTGCTCCTAAGAGAGCTCCTCTGTCATAG 705 0.417 MKGGIHEKQLPAWLERLMGETFFGGCGVHQHRKKNEKNVLCLHCCLSICPHCLPSHRHHPLLQVRRYVYHDVVRLNDLEKLIDCSNIQGYTINGAKVIFLKERVQSRSCKHTANVCCSCDRILQEPFHFCSLSCKVDYMLCKGERLSRILHQFNESDFSYYSQFEGLRVDSSEVIDEDHNAHFAPTTEEATSRSMNNSISSCEEDLNNSKGNGNFFLSLGSCRRKGAPKRAPLS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04745 234 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 233 - -
Vivi5g04745 234 Pfam PLATZ transcription factor 65 136 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04745 Vivi-Chr5 146259179 146265121 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vivi5g04745 PLATZ 2.9e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04745 5 146259179 146265121 Vivi5g04745 5 146259179 146265121 ECH