Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04742 ATGGTCGGAACCAGAAACTTGATCGTTCGATCATTGGCACTTCGTCACGCAATCAAGAACTCTGTTCGTCCTCTCTTAACCAACACCAACCTTCATTCCAGAATTTCCAAATCCTCTCTCTTCGCCGCCACACTCGCCTCTTCTTCCTACTCCACTCACCTCTCCTTCCACCATTCCCGTTCCCTTTCCTCCGCCTCAGCTTCCCCTGGCGTTATCCTTGTTAATTCTGCGGAAGAGTTCAATAAAATCCTCAGCAAAGTTCAAGATGACTCGTTGCACGCGATCTTCTATTTCACTGCTGTTTGGTGTGGACCTTGCAGGTTCATTTCTCCTATAGTTGGGGAGCTCAGTAACAAGTATCCTAATGTGGCAACTTATAAGATTGACATTGATCAGGAAGCAATTCAAGACACATTAAGCAGGTTGCAGATTACATCTGTGCCAACACTTCACTTCTTTCAAAATGGGAAAAAGACTGATGAACTTATAGGCGCTGATGTTGCGCGATTGAATCATATTACCGAGAAACTCTTCAAGAAGGACTAA 546 0.4469 MVGTRNLIVRSLALRHAIKNSVRPLLTNTNLHSRISKSSLFAATLASSSYSTHLSFHHSRSLSSASASPGVILVNSAEEFNKILSKVQDDSLHAIFYFTAVWCGPCRFISPIVGELSNKYPNVATYKIDIDQEAIQDTLSRLQITSVPTLHFFQNGKKTDELIGADVARLNHITEKLFKKD 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04742 181 Gene3D Glutaredoxin 67 179 - -
Vivi5g04742 181 Pfam Thioredoxin 73 167 IPR013766 -
Vivi5g04742 181 PANTHER THIOREDOXIN-LIKE PROTEIN 1 71 178 - -
Vivi5g04742 181 SUPERFAMILY Thioredoxin-like 63 166 IPR036249 -
Vivi5g04742 181 ProSiteProfiles Thioredoxin domain profile. 62 181 IPR013766 -
Vivi5g04742 181 CDD TRX_family 78 166 - -
Vivi5g04742 181 FunFam Thioredoxin 67 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04742 Vivi-Chr5 146225984 146229580 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04742 5 146225984 146229580 Vivi5g04742 5 146225984 146229580 ECH