Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04731 ATGAGATTCTCAACTGTGTATTTTGTTTTCTCATTGGTGTTGGTAATAGAAGCATCAACATGTTCCAAATTTTTCACCAGAGAGGAAAAGCTATCAGAGTTCAAACACAAACTTGATCAAACATTGGCTAATGCTTCACCACCTTTGGCATCGTCTTCACAAACAAACACGAGTAAGAGGGTATTGTACCTGAGTGAATATGGTGCAGACCCAACAGGATCAGAAGAGAGTAGTGATGCGATATTGAAAGCTGTGGAGGATGCATTTAAGTTGCAAAAGGGTCTGGAATTGGTAGCAGGCGTGAAAGATTTGGGGGGTGTTGTTATTGATTTGCAAGGTGGGGATTACAAAATCAGTAAACCAATTACTTTTGCACCAGGTGGTGGCAATGTTGTGGTTAAAGGAGGAACCTTGAGAGCATCTGATACTTTTCCTGGTGACCGACATCTAGTTGAGCTGAGCTCATCAAATTCCAACAAACTCAAGACAGCAGAATCTATGCAAAGTGGTAACCTCAGTGACATAAAGACACAAAACAATGGCATTTACTATGAAGACATAACTTTCAGGGACATCCTGTTTGATTCAAGCTACAGAGGAGGAGGAATATTCATTGTTGATTCCGCTAGAATCCGAATCAACAACTGTTTCTTCTTACATTTCACCACAGAAGGAATCCTAGTACAGAAAGGACACGAGACATTCATATCAAGTTGTTTTCTTGGACAACACTCAACAGTTGGTGGTGACCGCACTGAGAAGGACTTTTCGGGGGTCGCTATTGATCTTGCTAGTAACGATAATGCTGTCACGGATGTCGCGATTTTCTCAGCAGCCATTGGTATTGTGCTAAGGGGCCAAGCTAATATTCTATCAGGGGTGCATTGTTATAACAAAGCAACAGGATTTGGCGGTATAGGTATCTTAGTGAAATTAGCAGGAAATTCTTTAACTAGAATAGACAACTGTTATATGGATTATACTGGTATAGTAATGGAAGACCCTGTTCAAGTTCATGTCACTAATGGCCTGTTTCTCGGGGATGCTAATATTTTAGTAAAGTCGGTTAAAGGTCAGATTTTGGGCTTGAATATAGTTGATAATATGTTCAACGGCGATCCTAATAAGAAGGTTCCGATTGTAAGTCTCGACGGGCAATTTAGTAATGTTGATCAAGTAATGATTGATAGAAACAATGTAAACGGTATGGGGCTGAGATCAACCGTTGGGAAGTTAACTGTGAGCGGTAACGGCACAAAATGGGAGGCTGATTTTTCATCAGTTTTGGTATTTCCTAATCGGATTAATCATGTTCAGTATTCATTTTATGCTCAAGGGGAGCCAAAATTTGTGGCACATTCTGTTACGAATGTGTCGGATAATGTTGTAGTTGTGGAGAGTGAGAAAGAAGCTAAAGGATCGGTCTTCTTCAGAGTTGAACAATAA 1446 0.4025 MRFSTVYFVFSLVLVIEASTCSKFFTREEKLSEFKHKLDQTLANASPPLASSSQTNTSKRVLYLSEYGADPTGSEESSDAILKAVEDAFKLQKGLELVAGVKDLGGVVIDLQGGDYKISKPITFAPGGGNVVVKGGTLRASDTFPGDRHLVELSSSNSNKLKTAESMQSGNLSDIKTQNNGIYYEDITFRDILFDSSYRGGGIFIVDSARIRINNCFFLHFTTEGILVQKGHETFISSCFLGQHSTVGGDRTEKDFSGVAIDLASNDNAVTDVAIFSAAIGIVLRGQANILSGVHCYNKATGFGGIGILVKLAGNSLTRIDNCYMDYTGIVMEDPVQVHVTNGLFLGDANILVKSVKGQILGLNIVDNMFNGDPNKKVPIVSLDGQFSNVDQVMIDRNNVNGMGLRSTVGKLTVSGNGTKWEADFSSVLVFPNRINHVQYSFYAQGEPKFVAHSVTNVSDNVVVVESEKEAKGSVFFRVEQ 481
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04731 481 PANTHER POLYGALACTURONASE QRT3 11 481 IPR039279 GO:0004650
Vivi5g04731 481 FunFam Polygalacturonase QRT3 64 476 - -
Vivi5g04731 481 SUPERFAMILY Pectin lyase-like 64 403 IPR011050 -
Vivi5g04731 481 Gene3D - 65 476 IPR012334 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi5g04731 Vivi-Chr5 146096770 146099515 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04731 5 146096770 146099515 Vivi5g04731 5 146096770 146099515 ECH