Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03910 ATGGGTCTCGTTTCGAATCAACGAGGCTCGAGAACAGAGACGAAAACCCATGAGGGTTTACCGGTTTCGGTTTCGCCAGTAGGTGGTGCAGCGGTTACGAAGAAGAAATGGTCGAGTTTGTTGCCTTTATTTGTGGCTCTTGTGGTCATTGCAGAGATCGCGTTTTTGGGGAAGTTGGATATGGCGAAGAATGCAGCTATGGTGGCTGACTTGTTCTATCGGTCTCGTGTGGTTGTTGATAGTGATGATTTGGGGTTAGAGATGGTGGCTGGTGAGAGAAATTTTGAATCAAAGAAAGAAAGCTGTGAAGAGTGGTTGGAGAGAGAGGATTCTGTTACATATTTAAGGGACTTTGTTAAGGAACCTATTTTTATTACTGGAGCTGAACAGGAGTGGAGGTCATGTGCAGTAGGATGTAAATTTGGGTTTAATGGGAACCAGAAACCTGATGCTACATTTGGCTTACCTGAACAAGCTGGAACAGCAAGTGTTCTGCGATCAATGGAATCGGCACACTACTATCCAGAGAACAATCTTGCCATGGCACGACGGAGGGGATATAACATTGTAATGACAACTAGTCTATCATCTGATGTTCCTGTTGGATATTTTTCCTGGGCTGAGTATAACATCATGGCACCGATGGAGCCAAAAACTGAAAAAGCTCTTGCAGCTGCATTCATTTCCAACTGCGGTGCTCGGAATTTCCGGTTGCAAGCTCTTGAAGCCCTTGAAGGAACAAACATCTCTATTGACTCTTATGGTGGTTGTCATAGGAACCGTGATGGAAGAGTGAACAAAGTGGAAGCTCTGAAGCACTACAAATTTAGCTTAGCATTTGAAAATTCCAATGAGGAGGATTATGTGACTGAAAAATTCTTCCAATCCCTTGTCGCAGGAACAATCCCTGTGGTTGTCGGTGCTCCAAATATTCAAGATTTCGCTCCTTTTCCTGGTTCAGTTTTACATATTAAAGAGCTACAGGATGTTGAGTCTGTTGCCAAGACCATGAGATACCTAGCAGAAAACCCAGAAGCATATAATCAATCAATGAGGTGGAAGGTTGACGGCCCATCTGATTCCTTCAAGGCCCTTGTGGATATGGCAGCTGTACATTCATCTTGCCGCCTTTGCATTCACTTGGCCACAACGAGTAGAGAGAAGGAAGAAAAGAGCCCGGACTTCAAGAAACGCCCTTGCAAGTGCACTCGAGGGTCAGAAACCGTATATCATATCTACGTGAGAGAAAGAGGAACATTTGAGATGGAGTCCATTTACTTGAGATCGAGCGATTTAACTCTGGAGGCCTTCAAGTCTGCTGTTCTTAAGAAGTTCACATCCCTGAATCATGTTCCTGTATGGAAGTCTGAAAGACCCGAAGTTATAAAAGGTGGAAATGAATTAAAGATTTATAGAATACACCCCGTAGGATTGACACAGAGGCAAGCTCTTTATACGTTCCAGTTCGACGGGGATGTTGATTTCAAGAGTCACTTGGAAAGCAATCCTTGTGCCAAGTTTGAAGTAATTTTTGTGTAG 1539 0.4379 MGLVSNQRGSRTETKTHEGLPVSVSPVGGAAVTKKKWSSLLPLFVALVVIAEIAFLGKLDMAKNAAMVADLFYRSRVVVDSDDLGLEMVAGERNFESKKESCEEWLEREDSVTYLRDFVKEPIFITGAEQEWRSCAVGCKFGFNGNQKPDATFGLPEQAGTASVLRSMESAHYYPENNLAMARRRGYNIVMTTSLSSDVPVGYFSWAEYNIMAPMEPKTEKALAAAFISNCGARNFRLQALEALEGTNISIDSYGGCHRNRDGRVNKVEALKHYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGAPNIQDFAPFPGSVLHIKELQDVESVAKTMRYLAENPEAYNQSMRWKVDGPSDSFKALVDMAAVHSSCRLCIHLATTSREKEEKSPDFKKRPCKCTRGSETVYHIYVRERGTFEMESIYLRSSDLTLEAFKSAVLKKFTSLNHVPVWKSERPEVIKGGNELKIYRIHPVGLTQRQALYTFQFDGDVDFKSHLESNPCAKFEVIFV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03910 512 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 129 386 - -
Vivi5g03910 512 MobiDBLite consensus disorder prediction 1 20 - -
Vivi5g03910 512 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 48 461 IPR001503 GO:0006486|GO:0008417|GO:0016020
Vivi5g03910 512 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 220 388 IPR001503 GO:0006486|GO:0008417|GO:0016020
Vivi5g03910 512 Gene3D - 166 361 IPR038577 -
Vivi5g03910 512 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 169 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03910 Vivi-Chr5 134433085 134436966 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03910 1 512 Xyloglucan Fucosyltransferase1 AT3G19280 64.535 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03910 K00753 - gmx:100776065 838.18