Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03909 ATGGGTCTCGTTTCGAATCAACGAGGCTCGAGAACAGAGACGAAAACCCATGAGGGTTTACCGGTTTCGGTTTCGCCAGTAGGTGGTGCAGCGGTTACGAAGAAGAAATGGTCGAGTTTGTTGCCTTTATTTGTGGCTCTTGTGGTCATTGCAGAGATCGCGTTTTTGGGGAAGTTGGATATGGCGAAGAATGCAGCTATGGTGGCTGACTTGTTCTATCGGTCTCGTGTGGTTGTTGATAGTGATGATTTGGGGTTAGAGATGGTGGCTGGTGAGAGAAATTTTGAATCAAAGAAAGAAAGCTGTGAAGAGTGGTTGGAGAGAGAGGATTCTGTTACATATTTAAGGGACTTTGTTAAGGAACCTATTTTTATTACTGGAGCTGAACAGGAGTGGAGGTCATGTGCAGTAGGATGTAAATTTGGGTTTAATGGGAACCAGAAACCTGATGCTACATTTGGCTTACCTGAACAAGCTGGAACAGCAAGTGTTCTGCGATCAATGGAATCGGCACACTACTATCCAGAGAACAATCTTGCCATGGCACGACGGAGGGGATATAACATTGTAATGACAACTAGTCTATCATCTGATGTTCCTGTTGGATATTTTTCCTGGGCTGAGTATAACATCATGGCACCGATGGAGCCAAAAACTGAAAAAGCTCTTGCAGCTGCATTCATTTCCAACTGCGGTGCTCGGAATTTCCGGTTGCAAGCTCTTGAAGCCCTTGAAGGAACAAACATCTCTATTGACTCTTATGGTGGTTGTCATAGGAACCGTGATGGAAGAGCAGTGAACAAAGTGGAAGCTCTGAAGCACTACAAATTTAGCTTAGCATTTGAAAATTCCAATGAGGAGGATTATGTGACTGAAAAATTCTTCCAATCCCTTGTCGCAGGAACAATCCCTGTGGTTGTCGGTGCTCCAAATATTCAAGATTTCGCTCCTTTTCCTGGTTCAGTTTTACATATTAAAGAGCTACAGGATGTTGAGTCTGTTGCCAAGACCATGAGATACCTAGCAGAAAACCCAGAAGCATATAATCAATCAATGAGGTGGAAGGTTGACGGCCCATCTGATTCCTTCAAGGCCCTTGTGGATATGGCAGCTGTACATTCATCTTGCCGCCTTTGCATTCACTTGGCCACAACGAGTAGAGAGAAGGAAGAAAAGAGCCCGGACTTCAAGAAACGCCCTTGCAAGTGCACTCGAGGGTCAGAAACCGTATATCATATCTACGTGAGAGAAAGAGGAACATTTGAGATGGAGTCCATTTACTTGAGATCGAGCGATTTAACTCTGGAGGCCTTCAAGTCTGCTGTTCTTAAGAAGTTCACATCCCTGAATCATGTTCCTGTATGGAAGTCTGAAAGACCCGAAGTTATAAAAGGTGGAAATGAATTAAAGATTTATAGAATACACCCCGTAGGATTGACACAGAGGCAAGCTCTTTATACGTTCCAGTTCGACGGGGATGTTGATTTCAAGAGTCACTTGGAAAGCAATCCTTGTGCCAAGTTTGAAGTAATTTTTGTGTAG 1542 0.4384 MGLVSNQRGSRTETKTHEGLPVSVSPVGGAAVTKKKWSSLLPLFVALVVIAEIAFLGKLDMAKNAAMVADLFYRSRVVVDSDDLGLEMVAGERNFESKKESCEEWLEREDSVTYLRDFVKEPIFITGAEQEWRSCAVGCKFGFNGNQKPDATFGLPEQAGTASVLRSMESAHYYPENNLAMARRRGYNIVMTTSLSSDVPVGYFSWAEYNIMAPMEPKTEKALAAAFISNCGARNFRLQALEALEGTNISIDSYGGCHRNRDGRAVNKVEALKHYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGAPNIQDFAPFPGSVLHIKELQDVESVAKTMRYLAENPEAYNQSMRWKVDGPSDSFKALVDMAAVHSSCRLCIHLATTSREKEEKSPDFKKRPCKCTRGSETVYHIYVRERGTFEMESIYLRSSDLTLEAFKSAVLKKFTSLNHVPVWKSERPEVIKGGNELKIYRIHPVGLTQRQALYTFQFDGDVDFKSHLESNPCAKFEVIFV 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03909 513 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 48 462 IPR001503 GO:0006486|GO:0008417|GO:0016020
Vivi5g03909 513 MobiDBLite consensus disorder prediction 1 20 - -
Vivi5g03909 513 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 220 389 IPR001503 GO:0006486|GO:0008417|GO:0016020
Vivi5g03909 513 Gene3D - 166 362 IPR038577 -
Vivi5g03909 513 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 129 387 - -
Vivi5g03909 513 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 169 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03909 Vivi-Chr5 134433085 134436966 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03909 1 513 Xyloglucan Fucosyltransferase1 AT3G19280 64.410 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03909 K00753 - gmx:100776065 833.558