Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03850 ATGGGAATACCTGATACTTCATTTCTAGATCTAATAGAAAAGGTTAGGTCTTGGGTTTCTTGGGGAGGTGGTGATTTGTCTTGTTTATCTGAGAATTTTGATATGCAAAATAGTGTCTGCAAAATGTGTTGTGAGTGTGATACTAATTTGGGTGAGATGATGACTCAGTATAAGTATAATTGTAAGAGCTGTGGCCGTTGGTTGTGTGACAAGTGTATGAGAGTTTGTGATCTGCCCATTCTTGAATCTGATGGTGATAGTGGAATCAAGGAAGCTGTTAGTTCTTGCAAATTCTGTTCGGTTTCTGATAGGACGCGCGAGGGTCAGCCGAGGAAGTGTGTTGAGAAAGTGCATCCTGCTGTTTCTCCTCAAGAGAGTCCTAGGCAAAGTCCTGAGCCAAATTCGCCTTGTCTTAGCGGTGAAACGGAAAGAGATTGCTATTTTAATGATCGAGAGTCGGCGTATTATGCTCAATCCATGCTTAATAGGAGTTTGACCTCATCTGGTGCTCATTCTTCTTCAGTGGCCACTCTTCCATCTACCTTTAGGAGTGATGAAGAAGGGACGGAAGATTTTGGGAAGCACTCTCTCAGCCCATCTCATACATATTGTGATAACAATTCAGATGTAGATTCAAGTAGCGTTAGTGCTAGACATGACACTTACAACTTTAATTCTGTGGGGACAAGTCCTTCAGATAGCCCTTCTAGGATTGATTTTACTTCCAGTCGGGCCGGGCTTCCTATCCAGAAGAAGGGGCAGGAGAAAGGCCCCATTTATCAGTATGATGTTCCCTCTGGTCAACAAAATATGGTTGTTTTAAGTAAGCCTGAACCCGGGACTGAGGATGCATATAACACTACTTATTTTTCTGACGACTTGTCAATCCGGAATAGGATTGAGAATTCACAGAGGCCATTGGATTTTGAAAACAATGAACCAATTTGGTACCCTCCACCACCTGAAGACAAAGATGCTGATGCAGAAAGCAATTTCTTTGCATATGACGATGAGGATGATGATATTGGTGACTCTGGTGTCTTGTTCTCATCCAATAGCAGTCTATCTAATATGTTTCCTGCAAAAGAGAAACACAATGAGGGAAACAAGGAACCTTTAACATCTGTCGTACAGGGGCATTTTAGAGCTCTTGTTTCACAACTTTTACAGACAGAGGGAATTCAAGTTGGTAAGGAAAATGATTCTGTCGACTGGCTTGACATTGTTACAACTGTAGCATGGCAGGCTGCTAACTTTGTGAGACCAGACACTAGTAAAGGTGGCAGTATGGATCCCGGCAATTATGTAAAGGTCAAATGTGTAGCATCTGGAAGCCCGAATGACAGCACCCTTATCAAAGGAATTGTTTGCACAAAAAATATAAAGCACAAGCGCATGACCTCTCAATATAAAAGGCCTAGACTACTCCTCCTAGGAGGATCACTGGAATACCAGAAAGTTCCAAATCAGCTGGCTTCTTTCGATACATTGTTGCAGCAGGAAAATGATCATCTGAAGATGATTATTTCGATTATTGAGGCTCTTCGACCAAATGTTTTGCTTGTAGAAAAAAGTGTTGCTTCACAAGCCCAGGAATATTTACTGGCAAAGGAAATCTCCTTGGTGTTGAATGTTAAAAGGCCTTTGCTTGAGCGTATAGCTCGCTGCACTGGTGCTCTTATCGTTCCATCAGTGGATAGTTTATCAAAAGCACGTCTAGGGCACTGTGAATTGTTCCGGTTAGACCGGATTGTGGAAGATCACGAGGCTGGTAATCAGTCCAACAAAAAACCATCCAAAACATTAATGTTCTTTGAAGGTTGCCCGCGGCGTTTGGGATGCACGGTCTTACTGAAGGGCTCATGTCGTGAAGAACTGAAAAAAATTAAACATGTTGTGCAATATGCAATATTTGCAGCCTATCATTTATCTCTTGAAACCTCGTTCCTTGCTGATGAGGGTGCCACCCTGCCTAAAATGACAGTAAAACACTCTACAGACATGCGAGAGAGTGCAATCGCTGACCCTGACATTTCTGTAGTATCTAATTCTTTTTCTTCTACCATGTGCCAATCAGAGGCTGATGATGCTTCTAGAGCGAAAGACTCTATTGGTCACGATATAATGATTGGAGATCGGGGATCAGTGTCAGGGAGTCCTGATGAACTTAACTTTCATTCTTATAGAGGCACCATGGGGGATTATAGTGTTGAGAATATGCTCTCTGATCCATACTATAATAACCTAACATCTAATTTGACTTTAGAATCAGATTATTTGCATGAGTGCAGTGAATCAGAGGCAGACACTATGTCTAGAGACCCTTCGCGAGTAGATTTGCAAGAAACCATGCTTCAAGAGGAAAGAGAGTGTGAAGTTGTTGACTCCACAAAAGACAAGATTAATGAGGATGAATTTTCTGGTGAATACTTTTCTGCCGCCGAAGCCCATCAGAACATATTAGTGTATTTTTCCAGTCATTGTGTATCAAAAGGAACTTTATGTGAGCGCACTAGATTGCTGCGCATAAAGTTCTATGGCTCTTTTGATAAGCCACTTGGGAGATATCTCCATAATAGTCTATTTGATCAGACATATCGCTGTCAGTCTTGTAAAGAACCTGCAGAAGCCCATGTCCTTTGTTTTACACACCAGCAAGGAAATCTTACTATCAATGTTAGGCGCCTCCCCTCTGTAAAGTTACCGGGGGAAAGTGATGGCAAGATTTGGATGTGGCACCGGTGTCTGAGGTGTCCATATGTGGATGGAGTTCCACCAGCAACTCAGAGAGTTGTTATGTCGAAGTCTGCTTGGGGATTGTCTTTTGGAAAGTTCTTGGAACTTAGCTTCTCAAACCATGCAACTGCTAATCGAGTTGCTACCTGCGGACATTCTTTGCAAAGAGACTGCCTCCGGTTTTATGGGTTTGGGAGCATGGTTGTTTTCTTCCGGTATTCCCCCATTGATGTTCTTTCTGTCCATCTACCCCCATCTGTTCTGGAATTCGGCTACATCCAAGAAAAGTGGATTAGAAAGGTGGCAGGAGAGCTTTTTAGTAAAGTGGAAACCTTGTATGTGGAGATATCAAATGTGCTCGAACAATTGGAAACAAAGGTTTCGTCTCCAGGTGTTGGAAATGAGTTGTCAAATGCCCAAGACATTCATAACCACATACTTGATCTAAAAAACACGCTTCTAAGAGAAAAAATGGATTATCATACTTTGCTAAAATCAGCCGATGTGACTGCTGAGCCAGGAAATATGACTTTAGACATTCTGGAACTAAATCGGCTGAGACGTTCACTTCTAATTGGTTCACATGTTTGGGATCACCAGCTATCCACACTGGACTCTCTTATTAAAAGAAGTCTTAGTTCTAAAGTTAAACAAGAAAGGGAATCATTTGCTGATGTTAATAATGAATTAAGAGTTGACTCATTTCATAAGGATCAAAGTTTTGACTCTTGGCTGGAGCAAAATAACTCTCAGCCTTCAAAATTGCACGAGTCTCATGAAAGTCATAGGCTTGTAGAGCCAGATGACCAACTTGAGTCTCGTCATGGTTCTGAAGCATCTGCATGTTATCCTGATGGGGAAGAACCAAATTCCGATGGTGAATTTGTTTCCAACAATACATTATCTGACTGTATACCATCAAAGGAATCCAATCTTTCTGAACAAATAGATTTGGCATGGACTGGAACTGATCAACTTGTCCCCGTAAACTCTTCCTTTAAAAGGTTGACACAACCACTGAGAGTTCATTCTTTTGATTCGGCATTAAGAGTTCAAGAAAAAAACAAGAAAGACTTGCCCTCATCTTTACACATGTCAACGCGTCGATCTTTTCACGTTTCTGGAGACTACAGGAATATGGTCAGAGATCCTATCTCAAATGTGTTTCAAAGTAGCTTTCAAACGTTGCCGTGGGAATCTCAGAGGATAAATCTGATTTTGAGCTCCACGCCATCATTCCTTTCCTCCATTTCCCACATTGCTGAAGGTGCTCGGTTGCTGCTTCCCCAAACATGTCACGGTGATAGAGTTATAGCTGTATATGACAATGATTACTCCAGCATAATATCCTACGCCCTTAGCTCTAAGGATTACGAAGATTGGGTTTCTGGGAAGTCAGATCTACATGATGGGAACTGGAATTCTAGCGAGAGAAACAAAGAAGATTTAGCTAATTCCAACTTTTCTGCGTGGGCCACTTTGGACTTGGATTATATCAATTATGCTAGTTATGGCTCAGATGATGCTCCTCCATCTTCAATTAGTTCTTTTATTCGGGACAGCAAAAAACCTTTGCATGCGCAAATCTCTTTCGGCGACGATTCTTTGGGTGCTGGAGGTAAAGTGAACTTTTCTGTCACTTGCTATTTTGCAAAGCAGTTTGATTCACTTAGAAAAAAGTGCTGCCCTAACGAAGTTGATTATGTGCGATCCCTTACCCGTTGCCGGAGATGGAGTGCACAGGGAGGGAAAAGTAATGCATACTTTGCCAAGTCATTAGATGAAAGGTTTATTATAAAACAAGTGACAAAGACTGAATTGGAATCGTTTGAAGAGTTTGCACCTCAGTATTTCAAATACCTGATGGATGCAATGAACTCGGGTGGCCCAACTTGCCTTGCCAAAATTCTTGGTATTTATCAGGTCACTGTAAAATACCCAAAAGGTGGCAAGGAAACAAAGATAGATCTGATAGTAATGGAGAATCTCTTTTACAATAGAAACATAACCAGGGTGTATGATCTTAAAGGGTCAGAAAGATCTAGGTACAATGCAGATACAACTGGGACTAACAAAGTGATGCTAGACATGAATTTGTTAGAAACATTGAGAACAAATCCCATATTTCTCGGAAGTAAGGCTAAGCGAAAACTCGAGAGAGCTGTATGGAACGACACATCCTTTTTGGCGTCGGTTGCAGTTATGGATTACTCATTGTTGGTTGGGGTGGATGATGAGAAAAAGGAGCTGGTATTAGGGATAATTGATTTCATGAGACAATACACATGGGACAAGCATTTAGAGACATGGGTTAAAGCTTCTGGAATACTTGGGGGTCCTAAAAATGCTTCCCCCACAATTGTTTCACCAAAACAATACAAGAAAAGATTCCGGAAGGCCATGACTACATACTTTCTCACCTTACCTGATCAATGGTCTTGA 5178 0.4148 MGIPDTSFLDLIEKVRSWVSWGGGDLSCLSENFDMQNSVCKMCCECDTNLGEMMTQYKYNCKSCGRWLCDKCMRVCDLPILESDGDSGIKEAVSSCKFCSVSDRTREGQPRKCVEKVHPAVSPQESPRQSPEPNSPCLSGETERDCYFNDRESAYYAQSMLNRSLTSSGAHSSSVATLPSTFRSDEEGTEDFGKHSLSPSHTYCDNNSDVDSSSVSARHDTYNFNSVGTSPSDSPSRIDFTSSRAGLPIQKKGQEKGPIYQYDVPSGQQNMVVLSKPEPGTEDAYNTTYFSDDLSIRNRIENSQRPLDFENNEPIWYPPPPEDKDADAESNFFAYDDEDDDIGDSGVLFSSNSSLSNMFPAKEKHNEGNKEPLTSVVQGHFRALVSQLLQTEGIQVGKENDSVDWLDIVTTVAWQAANFVRPDTSKGGSMDPGNYVKVKCVASGSPNDSTLIKGIVCTKNIKHKRMTSQYKRPRLLLLGGSLEYQKVPNQLASFDTLLQQENDHLKMIISIIEALRPNVLLVEKSVASQAQEYLLAKEISLVLNVKRPLLERIARCTGALIVPSVDSLSKARLGHCELFRLDRIVEDHEAGNQSNKKPSKTLMFFEGCPRRLGCTVLLKGSCREELKKIKHVVQYAIFAAYHLSLETSFLADEGATLPKMTVKHSTDMRESAIADPDISVVSNSFSSTMCQSEADDASRAKDSIGHDIMIGDRGSVSGSPDELNFHSYRGTMGDYSVENMLSDPYYNNLTSNLTLESDYLHECSESEADTMSRDPSRVDLQETMLQEERECEVVDSTKDKINEDEFSGEYFSAAEAHQNILVYFSSHCVSKGTLCERTRLLRIKFYGSFDKPLGRYLHNSLFDQTYRCQSCKEPAEAHVLCFTHQQGNLTINVRRLPSVKLPGESDGKIWMWHRCLRCPYVDGVPPATQRVVMSKSAWGLSFGKFLELSFSNHATANRVATCGHSLQRDCLRFYGFGSMVVFFRYSPIDVLSVHLPPSVLEFGYIQEKWIRKVAGELFSKVETLYVEISNVLEQLETKVSSPGVGNELSNAQDIHNHILDLKNTLLREKMDYHTLLKSADVTAEPGNMTLDILELNRLRRSLLIGSHVWDHQLSTLDSLIKRSLSSKVKQERESFADVNNELRVDSFHKDQSFDSWLEQNNSQPSKLHESHESHRLVEPDDQLESRHGSEASACYPDGEEPNSDGEFVSNNTLSDCIPSKESNLSEQIDLAWTGTDQLVPVNSSFKRLTQPLRVHSFDSALRVQEKNKKDLPSSLHMSTRRSFHVSGDYRNMVRDPISNVFQSSFQTLPWESQRINLILSSTPSFLSSISHIAEGARLLLPQTCHGDRVIAVYDNDYSSIISYALSSKDYEDWVSGKSDLHDGNWNSSERNKEDLANSNFSAWATLDLDYINYASYGSDDAPPSSISSFIRDSKKPLHAQISFGDDSLGAGGKVNFSVTCYFAKQFDSLRKKCCPNEVDYVRSLTRCRRWSAQGGKSNAYFAKSLDERFIIKQVTKTELESFEEFAPQYFKYLMDAMNSGGPTCLAKILGIYQVTVKYPKGGKETKIDLIVMENLFYNRNITRVYDLKGSERSRYNADTTGTNKVMLDMNLLETLRTNPIFLGSKAKRKLERAVWNDTSFLASVAVMDYSLLVGVDDEKKELVLGIIDFMRQYTWDKHLETWVKASGILGGPKNASPTIVSPKQYKKRFRKAMTTYFLTLPDQWS 1725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03850 1725 MobiDBLite consensus disorder prediction 167 216 - -
Vivi5g03850 1725 SUPERFAMILY SAICAR synthase-like 1450 1717 - -
Vivi5g03850 1725 SMART PIPK_2 1425 1718 IPR002498 GO:0016307|GO:0046488
Vivi5g03850 1725 Pfam TCP-1/cpn60 chaperonin family 404 651 IPR002423 GO:0005524
Vivi5g03850 1725 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1396 1717 IPR002498 GO:0016307|GO:0046488
Vivi5g03850 1725 CDD Fab1_TCP 382 654 - -
Vivi5g03850 1725 MobiDBLite consensus disorder prediction 1159 1214 - -
Vivi5g03850 1725 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 447 620 - -
Vivi5g03850 1725 CDD PIPKc_PIKfyve 1454 1717 IPR044769 GO:0000285
Vivi5g03850 1725 MobiDBLite consensus disorder prediction 1165 1187 - -
Vivi5g03850 1725 FunFam Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C 1403 1574 - -
Vivi5g03850 1725 Gene3D GroEL 447 620 IPR027409 -
Vivi5g03850 1725 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1576 1718 - -
Vivi5g03850 1725 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 30 1724 - -
Vivi5g03850 1725 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1412 1574 IPR027484 -
Vivi5g03850 1725 SUPERFAMILY GroEL apical domain-like 448 620 IPR027409 -
Vivi5g03850 1725 MobiDBLite consensus disorder prediction 123 137 - -
Vivi5g03850 1725 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1493 1660 IPR002498 GO:0016307|GO:0046488
Vivi5g03850 1725 MobiDBLite consensus disorder prediction 195 216 - -
Vivi5g03850 1725 MobiDBLite consensus disorder prediction 167 183 - -
Vivi5g03850 1725 MobiDBLite consensus disorder prediction 110 140 - -
Vivi5g03850 1725 Gene3D - 1575 1718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03850 Vivi-Chr5 133228191 133235492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03850 1 1725 Acyl Lipid Metabolism Gene Families AT1G71010 53.217 0.0 1688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03850 5 133228191 133235492 Vivi5g03850 5 133228191 133235492 ECH
Vivi1g00850 1 18238888 18248429 Vivi5g03850 5 133228191 133235492 PCT